RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 EDARQ9UNE0 448 aa9.78□□□□□ -0.84
USB1-212ENST00000566082 PLGP00747 810 aaPredicted RBP9.77□□□□□ -0.85
USB1-212ENST00000566082 AKR1C4P17516 323 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 OPRD1P41143 372 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 RAD52P43351 418 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 TPMTP51580 245 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 HNRNPA1L2Q32P51 320 aaKnown RBP9.77□□□□□ -0.85
USB1-212ENST00000566082 RNASE10Q5GAN6 216 aaKnown RBP9.77□□□□□ -0.85
USB1-212ENST00000566082 FAM76BQ5HYJ3 339 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 NIPAL3Q6P499 406 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 GTPBP8Q8N3Z3 284 aaPredicted RBP9.77□□□□□ -0.85
USB1-212ENST00000566082 OR8D4Q8NGM9 314 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 OR10K1Q8NGX5 313 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 HERVK_113Q902F9 699 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 SEC22AQ96IW7 307 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 FOXN4Q96NZ1 517 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 DERL3Q96Q80 235 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 TMEM106CQ9BVX2 250 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 C1QTNF6Q9BXI9 259 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 FBXL21Q9UKT6 434 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 ERVK-19Q9WJR5 959 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 ALPK2Q86TB3 2170 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.77□□□□□ -0.85
USB1-212ENST00000566082 SCDO00767 359 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 TOR1AO14656 332 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 PRICKLE3O43900 615 aaPredicted RBP9.77□□□□□ -0.85
USB1-212ENST00000566082 SDC3O75056 442 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 PPM1BO75688 479 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 MAKP20794 623 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 PRKAR1BP31321 381 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 REEP5Q00765 189 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 YOD1Q5VVQ6 348 aaPredicted RBP9.77□□□□□ -0.85
USB1-212ENST00000566082 PLA2G15Q8NCC3 412 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 ARRDC3Q96B67 414 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 NMNAT3Q96T66 252 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 NRTNQ99748 197 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 PNO1Q9NRX1 252 aaKnown RBP9.77□□□□□ -0.85
USB1-212ENST00000566082 GLS2Q9UI32 602 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 ADAM29Q9UKF5 820 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 DHDHQ9UQ10 334 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 NEUROG3Q9Y4Z2 214 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 TMEM72A0PK05 275 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 LRIT2A6NDA9 550 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 ZNF593O00488 134 aaPredicted RBP9.77□□□□□ -0.85
USB1-212ENST00000566082 CSF2RAP15509 400 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 PPP3CBP16298 524 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 DEFB103AP81534 67 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 CDK5Q00535 292 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 LTBQ06643 244 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 MPEG1Q2M385 716 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 ZXDCQ2QGD7 858 aaPredicted RBP9.77□□□□□ -0.85
USB1-212ENST00000566082 RPL22L1Q6P5R6 122 aaKnown RBP9.77□□□□□ -0.85
USB1-212ENST00000566082 TSSK4Q6SA08 328 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 PLPP6Q8IY26 295 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 AMER3Q8N944 861 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 ANKRD53Q8N9V6 530 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 VN1R2Q8NFZ6 395 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 ST8SIA2Q92186 375 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 PLEKHA1Q9HB21 404 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 HRASLS2Q9NWW9 162 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 KCMF1Q9P0J7 381 aa9.77□□□□□ -0.85
USB1-212ENST00000566082 M0R036 132 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 PRAMEF2O60811 474 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 DCNP07585 359 aaKnown RBP9.76□□□□□ -0.85
USB1-212ENST00000566082 SPTBP11277 2137 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 PTHLHP12272 177 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 BCL6P41182 706 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 VASPP50552 380 aaPredicted RBP9.76□□□□□ -0.85
USB1-212ENST00000566082 ACTBP60709 375 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 RPS15AP62244 130 aaKnown RBP9.76□□□□□ -0.85
USB1-212ENST00000566082 ACTG1P63261 375 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 RAB11BQ15907 218 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 ST3GAL2Q16842 350 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 TCEAL5Q5H9L2 206 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 ARHGAP40Q5TG30 622 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 OR5M10Q6IEU7 315 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 SLC25A24Q6NUK1 477 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 SLC48A1Q6P1K1 146 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 ABHD17CQ6PCB6 329 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 ZNF511Q8NB15 262 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 DVL3Q92997 716 aaPredicted RBP9.76□□□□□ -0.85
USB1-212ENST00000566082 RAB7BQ96AH8 199 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 CST11Q9H112 138 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 MKL2Q9ULH7 1088 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 PRAMEF25A6NGN4 478 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 VNN2O95498 520 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 IL12BP29460 328 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 DLSTP36957 453 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 DUSP5Q16690 384 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.76□□□□□ -0.85
USB1-212ENST00000566082 DEFB110Q30KQ9 67 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 C9orf62Q8N4C0 152 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 RELL2Q8NC24 303 aaPredicted RBP9.76□□□□□ -0.85
USB1-212ENST00000566082 OR2L3Q8NG85 312 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 CNRIP1Q96F85 164 aaPredicted RBP9.76□□□□□ -0.85
USB1-212ENST00000566082 TMEM41AQ96HV5 264 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 OR2M4Q96R27 311 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 ZNF416Q9BWM5 594 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 TBL1XR1Q9BZK7 514 aa9.76□□□□□ -0.85
USB1-212ENST00000566082 KLK11Q9UBX7 282 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms