RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 IGKV1D-8A0A087WSZ0 117 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 IGHV1OR21-1A0A087WYE8 117 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 TRBV2A0A0J9YWF9 115 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 AGPAT2O15120 278 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 PRKYO43930 277 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 VAMP5O95183 116 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 ADRA2AP08913 450 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 P0C880 135 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 UQCRBP14927 111 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 CXCR2P25025 360 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 SLC26A3P40879 764 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 KIR2DS4P43632 304 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 VDAC2P45880 294 aaPredicted RBP0.84□□□□□ -2.27
FOXN3-216ENST00000557496 PRKXP51817 358 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 OSTNP61366 133 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 SNX1Q13596 522 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 CUL1Q13616 776 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 EXOSC2Q13868 293 aaKnown RBP0.84□□□□□ -2.27
FOXN3-216ENST00000557496 NSUN5P1Q3KNT7 163 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 APTXQ7Z2E3 356 aaKnown RBP0.84□□□□□ -2.27
FOXN3-216ENST00000557496 EFCAB13Q8IY85 973 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 FTMTQ8N4E7 242 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 OR5W2Q8NH69 310 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 MCOLN3Q8TDD5 553 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 NCLNQ969V3 563 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 EEF2KMTQ96G04 330 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 JAKMIP1Q96N16 626 aaKnown RBP0.84□□□□□ -2.27
FOXN3-216ENST00000557496 NAT10Q9H0A0 1025 aaKnown RBP0.84□□□□□ -2.27
FOXN3-216ENST00000557496 ALDH8A1Q9H2A2 487 aaPredicted RBP0.84□□□□□ -2.27
FOXN3-216ENST00000557496 LPAR2Q9HBW0 351 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 NOX3Q9HBY0 568 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 HEBP2Q9Y5Z4 205 aa0.84□□□□□ -2.27
FOXN3-216ENST00000557496 LTBP4Q8N2S1 1624 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 PLAC8L1A1L4L8 177 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 ANKRD30BLA7E2S9 258 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 C16orf90A8MZG2 172 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 K7EM74 188 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 SRP72O76094 671 aaKnown RBP0.83□□□□□ -2.28
FOXN3-216ENST00000557496 LINC00869P0C866 280 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 CD99P14209 185 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 LGALS3P17931 250 aaKnown RBP0.83□□□□□ -2.28
FOXN3-216ENST00000557496 CYP2B6P20813 491 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 MORF4L2Q15014 288 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 GPRC6AQ5T6X5 926 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 ACSM5Q6NUN0 579 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 C1orf94Q6P1W5 598 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 CCDC137Q6PK04 289 aaKnown RBP0.83□□□□□ -2.28
FOXN3-216ENST00000557496 ZDHHC21Q8IVQ6 265 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 OR4F15Q8NGB8 312 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 PTP4A1Q93096 173 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 CCNL2Q96S94 520 aaPredicted RBP0.83□□□□□ -2.28
FOXN3-216ENST00000557496 DNTTIP1Q9H147 329 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 IL20RAQ9UHF4 553 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 RNF6Q9Y252 685 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 AP4B1Q9Y6B7 739 aa0.83□□□□□ -2.28
FOXN3-216ENST00000557496 VSTM2BA6NLU5 285 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 VGLL3A8MV65 326 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 WASH3PC4AMC7 463 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 MBTPS2O43462 519 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 DUX1O43812 170 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 UGT2B17O75795 530 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 CDRT1O95170 752 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 F10P00742 488 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 TCN2P20062 427 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 PRDX6P30041 224 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 FMO3P31513 532 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 GFPT1Q06210 699 aaPredicted RBP0.82□□□□□ -2.28
FOXN3-216ENST00000557496 SMARCB1Q12824 385 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 KIAA0087Q14695 138 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 IRF4Q15306 451 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 SLC5A12Q1EHB4 618 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 WASH2PQ6VEQ5 465 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 PAQR7Q86WK9 346 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 DQX1Q8TE96 717 aaKnown RBP0.82□□□□□ -2.28
FOXN3-216ENST00000557496 ST8SIA1Q92185 356 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 TM4SF19Q96DZ7 209 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 SPATA13Q96N96 652 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 OR2A5Q96R48 311 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 RPP21Q9H633 154 aaKnown RBP0.82□□□□□ -2.28
FOXN3-216ENST00000557496 CLMPQ9H6B4 373 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 ZNF355PQ9NSJ1 428 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 HMG20BQ9P0W2 317 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 CLCF1Q9UBD9 225 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 PCYOX1Q9UHG3 505 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 ZNF230Q9UIE0 474 aaPredicted RBP0.82□□□□□ -2.28
FOXN3-216ENST00000557496 ZNF391Q9UJN7 358 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 SLC25A15Q9Y619 301 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 S4R3C0 116 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 SH3TC1Q8TE82 1336 aa0.82□□□□□ -2.28
FOXN3-216ENST00000557496 ATP10DQ9P241 1426 aa0.81□□□□□ -2.28
FOXN3-216ENST00000557496 IGHV2-70DA0A0C4DH43 119 aa0.81□□□□□ -2.28
FOXN3-216ENST00000557496 GSAPA4D1B5 854 aa0.81□□□□□ -2.28
FOXN3-216ENST00000557496 E7ESA3 106 aa0.81□□□□□ -2.28
FOXN3-216ENST00000557496 LGALS8O00214 317 aa0.81□□□□□ -2.28
FOXN3-216ENST00000557496 PEX7O00628 323 aa0.81□□□□□ -2.28
FOXN3-216ENST00000557496 RBFOX2O43251 390 aaKnown RBP eCLIP0.81□□□□□ -2.283e-8■■■■■ 28.6
FOXN3-216ENST00000557496 DEDDO75618 318 aa0.81□□□□□ -2.28
FOXN3-216ENST00000557496 RALAP11233 206 aa0.81□□□□□ -2.28
FOXN3-216ENST00000557496 PAICSP22234 425 aaKnown RBP0.81□□□□□ -2.28
FOXN3-216ENST00000557496 CALB2P22676 271 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 375.2 ms