RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 CCDC22O60826 627 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 SERPINB7O75635 380 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 CXCR1P25024 350 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 LSP1P33241 339 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 PCGF2P35227 344 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 UGT2B10P36537 528 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 PCBP3P57721 371 aaKnown RBP10.53□□□□□ -0.72
RAB5C-204ENST00000547517 OR2B6P58173 313 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 GNGT1P63211 74 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 DMTNQ08495 405 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 RASGEF1BQ0VAM2 473 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 BNIP2Q12982 314 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 ABLIM2Q6H8Q1 611 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 NANOGP8Q6NSW7 305 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 NUFIP2Q7Z417 695 aaKnown RBP10.53□□□□□ -0.72
RAB5C-204ENST00000547517 STK32CQ86UX6 486 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 SMYD1Q8NB12 490 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 PCYOX1LQ8NBM8 494 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 OR8J3Q8NGG0 315 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 SLC35B4Q969S0 331 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 C3orf49Q96BT1 292 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 RCN3Q96D15 328 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 ZNF300Q96RE9 604 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-204ENST00000547517 TACO1Q9BSH4 297 aaKnown RBP10.53□□□□□ -0.72
RAB5C-204ENST00000547517 KLHL4Q9C0H6 718 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 ADAM19Q9H013 955 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 NANOGQ9H9S0 305 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 PLSCR4Q9NRQ2 329 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 ELOVL5Q9NYP7 299 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 TMEM181Q9P2C4 612 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 RPS6KB2Q9UBS0 482 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 TESMINQ9Y4I5 508 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 APCP25054 2843 aa10.53□□□□□ -0.72
RAB5C-204ENST00000547517 CSMD1Q96PZ7 3565 aa10.52□□□□□ -0.72
RAB5C-204ENST00000547517 A6NNC1 897 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 MFN2O95140 757 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 YES1P07947 543 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 EPXP11678 715 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 IMPDH2P12268 514 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 DRD4P21917 467 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 FKBP2P26885 142 aaKnown RBP10.52□□□□□ -0.73
RAB5C-204ENST00000547517 HTR2AP28223 471 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 IDUAP35475 653 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 CLK1P49759 484 aaKnown RBP10.52□□□□□ -0.73
RAB5C-204ENST00000547517 RGS8P57771 180 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-204ENST00000547517 FBXW10Q5XX13 1052 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 TFAP2EQ6VUC0 442 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.52□□□□□ -0.73
RAB5C-204ENST00000547517 ATG4DQ86TL0 474 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-204ENST00000547517 MTDHQ86UE4 582 aaKnown RBP10.52□□□□□ -0.73
RAB5C-204ENST00000547517 SLC30A8Q8IWU4 369 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 ZNF775Q96BV0 537 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-204ENST00000547517 SH3GL1Q99961 368 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 ECSITQ9BQ95 431 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 MED18Q9BUE0 208 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 BCO1Q9HAY6 547 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 GP6Q9HCN6 339 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 GID8Q9NWU2 228 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 KLHL28Q9NXS3 571 aa10.52□□□□□ -0.73
RAB5C-204ENST00000547517 TESQ9UGI8 421 aaKnown RBP10.52□□□□□ -0.73
RAB5C-204ENST00000547517 ING1Q9UK53 422 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-204ENST00000547517 A0A1B0GWA3 101 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 TMEM229AB2RXF0 380 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 ZNF814B7Z6K7 855 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 C16orf97H3BN30 126 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 M0R3H8 397 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 DNPH1O43598 174 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 RAMP1O60894 148 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 CTAG2O75638 210 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 NPPAP01160 153 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 COX4I1P13073 169 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 FPR1P21462 350 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 GZMMP51124 257 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 MAP2K6P52564 334 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 SLC35A1P78382 337 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 CEACAM7Q14002 265 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 POU4F3Q15319 338 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 OR7A5Q15622 319 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 VMACQ2NL98 169 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 INTS11Q5TA45 600 aaKnown RBP10.51□□□□□ -0.73
RAB5C-204ENST00000547517 ANKRD34AQ69YU3 496 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 BEND4Q6ZU67 534 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 CPLX4Q7Z7G2 160 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 PATL1Q86TB9 770 aaKnown RBP10.51□□□□□ -0.73
RAB5C-204ENST00000547517 TREML1Q86YW5 311 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 CCDC103Q8IW40 242 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 BHLHE22Q8NFJ8 381 aaPredicted RBP10.51□□□□□ -0.73
RAB5C-204ENST00000547517 GPR32P1Q8NGA4 272 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 OR52E4Q8NGH9 312 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 RP9Q8TA86 221 aaKnown RBP10.51□□□□□ -0.73
RAB5C-204ENST00000547517 PIGXQ8TBF5 258 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 TAMM41Q96BW9 452 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 ZC3HAV1LQ96H79 300 aaKnown RBP10.51□□□□□ -0.73
RAB5C-204ENST00000547517 DACH2Q96NX9 599 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 WFDC6Q9BQY6 131 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 PRR14Q9BWN1 585 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 POLDIP3Q9BY77 421 aaKnown RBP10.51□□□□□ -0.73
RAB5C-204ENST00000547517 CLEC4MQ9H2X3 399 aaPredicted RBP10.51□□□□□ -0.73
RAB5C-204ENST00000547517 EMC3Q9P0I2 261 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 NDRG3Q9UGV2 375 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms