RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 GPRIN2O60269 458 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 BCAS1O75363 584 aaPredicted RBP14.33□□□□□ -0.12
DDX55-212ENST00000544738 GSNP06396 782 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 DBIP07108 87 aaKnown RBP14.33□□□□□ -0.12
DDX55-212ENST00000544738 UQCRBP14927 111 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 IL7RP16871 459 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 CDKN2CP42773 168 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 IDH2P48735 452 aaKnown RBP14.33□□□□□ -0.12
DDX55-212ENST00000544738 TAB1Q15750 504 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 ETFDHQ16134 617 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 ALKBH2Q6NS38 261 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 BHLHA15Q7RTS1 189 aaPredicted RBP14.33□□□□□ -0.12
DDX55-212ENST00000544738 ADGRG3Q86Y34 549 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 PIGXQ8TBF5 258 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 PIWIL2Q8TC59 973 aaKnown RBP14.33□□□□□ -0.12
DDX55-212ENST00000544738 WDR60Q8WVS4 1066 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 ZNF75CPQ92670 426 aaPredicted RBP14.33□□□□□ -0.12
DDX55-212ENST00000544738 GTPBP3Q969Y2 492 aaKnown RBP14.33□□□□□ -0.12
DDX55-212ENST00000544738 TLCD1Q96CP7 247 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 ZNF300Q96RE9 604 aaPredicted RBP14.33□□□□□ -0.12
DDX55-212ENST00000544738 KCNK17Q96T54 332 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 POTEKPQ9BYX7 375 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 RMND5AQ9H871 391 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 TMBIM4Q9HC24 238 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 CALML5Q9NZT1 146 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 TRAPPC4Q9Y296 219 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 CLDN24A6NM45 220 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 FAAHO00519 579 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 KLF11O14901 512 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 ADAM11O75078 769 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 ANP32DO95626 131 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 CD3EP07766 207 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 CHRM4P08173 479 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 ZCCHC18P0CG32 403 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 TSC22D1Q15714 1073 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 NCMAPQ5T1S8 102 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 ABLIM2Q6H8Q1 611 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 MSANTD1Q6ZTZ1 278 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 P2RY8Q86VZ1 359 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 PEX5LQ8IYB4 626 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 ZNF440Q8IYI8 595 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 CNOT9Q92600 299 aaKnown RBP14.32□□□□□ -0.12
DDX55-212ENST00000544738 AKAP1Q92667 903 aaKnown RBP eCLIP14.32□□□□□ -0.12
DDX55-212ENST00000544738 ZNF775Q96BV0 537 aaPredicted RBP14.32□□□□□ -0.12
DDX55-212ENST00000544738 DDIT4LQ96D03 193 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 MUCL1Q96DR8 90 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 ARL5BQ96KC2 179 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 SLCO5A1Q9H2Y9 848 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 SDR39U1Q9NRG7 319 aaPredicted RBP14.32□□□□□ -0.12
DDX55-212ENST00000544738 THUMPD1Q9NXG2 353 aaKnown RBP14.32□□□□□ -0.12
DDX55-212ENST00000544738 ZIM2Q9NZV7 527 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 RNF115Q9Y4L5 304 aa14.32□□□□□ -0.12
DDX55-212ENST00000544738 TMED7-TICAM2A0A0A6YYA0 188 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 UBDO15205 165 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 ZNF208O43345 1280 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 EIF1BO60739 113 aaKnown RBP14.31□□□□□ -0.12
DDX55-212ENST00000544738 C1QCP02747 245 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 RPS4Y1P22090 263 aaKnown RBP14.31□□□□□ -0.12
DDX55-212ENST00000544738 CDKN1AP38936 164 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 SLC1A3P43003 542 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 POLR2HP52434 150 aaKnown RBP14.31□□□□□ -0.12
DDX55-212ENST00000544738 PLAURQ03405 335 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 SLC9B1Q4ZJI4 515 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 COX20Q5RI15 118 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 BEND6Q5SZJ8 279 aaPredicted RBP14.31□□□□□ -0.12
DDX55-212ENST00000544738 HMGN2P46Q86SG4 172 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 PNPT1Q8TCS8 783 aaKnown RBP14.31□□□□□ -0.12
DDX55-212ENST00000544738 FBXW5Q969U6 566 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 ITCHQ96J02 903 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 TMEM181Q9P2C4 612 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 P2RX2Q9UBL9 471 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 PRSS50Q9UI38 385 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 NOSIPQ9Y314 301 aaKnown RBP14.31□□□□□ -0.12
DDX55-212ENST00000544738 TMED7Q9Y3B3 224 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 FREM1Q5H8C1 2179 aa14.31□□□□□ -0.12
DDX55-212ENST00000544738 ALPK2Q86TB3 2170 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 CFAP73A6NFT4 308 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 ZNF716A6NP11 495 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 LYZL6O75951 148 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 GGT1P19440 569 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 CCNA2P20248 432 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 TACR3P29371 465 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 CRATP43155 626 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 POLR2JP52435 117 aaKnown RBP14.3□□□□□ -0.12
DDX55-212ENST00000544738 SLC16A1P53985 500 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 CRISP3P54108 245 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 OR2B6P58173 313 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 SLC35A1P78382 337 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 ZSWIM7Q19AV6 140 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 TIMM23BQ5SRD1 257 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 C6orf52Q5T4I8 152 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 MRPL2Q5T653 305 aaKnown RBP14.3□□□□□ -0.12
DDX55-212ENST00000544738 FBXW9Q5XUX1 488 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 UBE2J2Q8N2K1 259 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 APH1AQ96BI3 265 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 OR11A1Q9GZK7 315 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 TPT1P8Q9HAU6 139 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 OSGIN1Q9UJX0 560 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 SVEP1Q4LDE5 3571 aa14.3□□□□□ -0.12
DDX55-212ENST00000544738 TMEM247A6NEH6 219 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms