RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 POLR2J2Q9GZM3 115 aaKnown RBP9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 YIPF3Q9GZM5 350 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 PRDM14Q9GZV8 571 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 POLR2J3Q9H1A7 115 aaKnown RBP9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 TMEM185BQ9H7F4 350 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 TMEM27Q9HBJ8 222 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 MEPEQ9NQ76 525 aaPredicted RBP9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 ARMC1Q9NVT9 282 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 CHRNA9Q9UGM1 479 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 SCOCQ9UIL1 159 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 SLC7A7Q9UM01 511 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 MPDZO75970 2070 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 TRBV4-1A0A0J9YWV2 114 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 A0A1W2PRQ8 180 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 FTCDNL1E5RQL4 147 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 ZNF208O43345 1280 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 CIB2O75838 187 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 ACTL6AO96019 429 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 THRBP10828 461 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 IMPDH2P12268 514 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 CPN1P15169 458 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 CCNA2P20248 432 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 PTNP21246 168 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 HTR3AP46098 478 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 PTDSS1P48651 473 aaKnown RBP9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 UGT2B15P54855 530 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 COPZ1P61923 177 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 CHRNB3Q05901 458 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 PPP1R8Q12972 351 aaKnown RBP9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 SELENBP1Q13228 472 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 DGCR6Q14129 220 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 BCL2A1Q16548 175 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 FAM98BQ52LJ0 330 aaKnown RBP9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 ALG10BQ5I7T1 473 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 HMBOX1Q6NT76 420 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 ARHGAP11AQ6P4F7 1023 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 POMZP3Q6PJE2 187 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 TBPL2Q6SJ96 375 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 PLXDC2Q6UX71 529 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 Q6ZPB1 254 aaPredicted RBP9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 GHDCQ8N2G8 530 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 PYDC1Q8WXC3 89 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 KTI12Q96EK9 354 aaPredicted RBP9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 PNPLA3Q9NST1 481 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 C20orf141Q9NUB4 165 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 NKX1-2Q9UD57 310 aaPredicted RBP9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 AURKCQ9UQB9 309 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 LYVE1Q9Y5Y7 322 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 AP4B1Q9Y6B7 739 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 KIAA1549Q9HCM3 1950 aa9.59□□□□□ -0.87
NPIPB3-210ENST00000542817 A0A087WUU8 490 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 A0A1W2PNR3 127 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 OR14I1A6ND48 311 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 ZNF814B7Z6K7 855 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 NPIPA2E9PIF3 369 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 NPIPA3F8WFD2 350 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 H3BML4 177 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 LINC01387J3KSC0 135 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 TIPRLO75663 272 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 UQCRBP14927 111 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 RRM2P31350 389 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 P2RY4P51582 365 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 IST1P53990 364 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 TAS2R41P59536 307 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 FHL1Q13642 323 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 IGFBP7Q16270 282 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 TMEM176BQ3YBM2 270 aaPredicted RBP9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 SYT14P1Q58G82 188 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 RTL6Q6ICC9 239 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 ZNF770Q6IQ21 691 aaPredicted RBP9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 AAGABQ6PD74 315 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 PODNL1Q6PEZ8 512 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 SEM1Q6ZVN7 128 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 ST6GALNAC3Q8NDV1 305 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 POP5Q969H6 163 aaKnown RBP9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 TAAR8Q969N4 342 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 ZNF845Q96IR2 970 aaPredicted RBP9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 GPA33Q99795 319 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 TMEM43Q9BTV4 400 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 SRXN1Q9BYN0 137 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 VCX3BQ9H321 246 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 LDAHQ9H6V9 325 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 S100A14Q9HCY8 104 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 VCX3AQ9NNX9 186 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 AGPAT4Q9NRZ5 378 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 NDUFA13Q9P0J0 144 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 STX18Q9P2W9 335 aaKnown RBP9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 TESMINQ9Y4I5 508 aa9.58□□□□□ -0.88
NPIPB3-210ENST00000542817 A8MVM7 634 aa9.57□□□□□ -0.88
NPIPB3-210ENST00000542817 FAM47E-STBD1D6RA91 191 aa9.57□□□□□ -0.88
NPIPB3-210ENST00000542817 LRRN3E7EW58 273 aa9.57□□□□□ -0.88
NPIPB3-210ENST00000542817 TNFSF11O14788 317 aa9.57□□□□□ -0.88
NPIPB3-210ENST00000542817 KLF4O43474 513 aa9.57□□□□□ -0.88
NPIPB3-210ENST00000542817 PIP5K1CO60331 668 aa9.57□□□□□ -0.88
NPIPB3-210ENST00000542817 KRT36O76013 467 aa9.57□□□□□ -0.88
NPIPB3-210ENST00000542817 H1F0P07305 194 aaKnown RBP9.57□□□□□ -0.88
NPIPB3-210ENST00000542817 PNMTP11086 282 aa9.57□□□□□ -0.88
NPIPB3-210ENST00000542817 ITGA2P17301 1181 aa9.57□□□□□ -0.88
NPIPB3-210ENST00000542817 POU3F2P20265 443 aaPredicted RBP9.57□□□□□ -0.88
NPIPB3-210ENST00000542817 CXCR1P25024 350 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms