RNA–Protein interactions for RNA: ENST00000539652.1

AC078927.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC078927.1, Length 984 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078927.1-201ENST00000539652 PKNOX1P55347 436 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 RPL38P63173 70 aaKnown RBP8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 SLC7A5Q01650 507 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 NAAAQ02083 359 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 SKP2Q13309 424 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 TBRG1Q3YBR2 411 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 SPDYE7PQ495Y7 208 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 EXOSC6Q5RKV6 272 aaKnown RBP8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 CLEC6AQ6EIG7 209 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 ZNF786Q8N393 782 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 C17orf78Q8N4C9 275 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 ZNF563Q8TA94 476 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 ADAMTS15Q8TE58 950 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 MRPL24Q96A35 216 aaKnown RBP8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 ZNF385AQ96PM9 386 aaKnown RBP8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 ALKBH3Q96Q83 286 aaPredicted RBP8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 PIGUQ9H490 435 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 REEP4Q9H6H4 257 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 ZNF696Q9H7X3 374 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 SIRT5Q9NXA8 310 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 KCNE5Q9UJ90 142 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 DCTN4Q9UJW0 460 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 GRIP1Q9Y3R0 1128 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 SPEF1Q9Y4P9 236 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 PCDHB14Q9Y5E9 798 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 FLVCR1Q9Y5Y0 555 aa8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 NUP214P35658 2090 aaPredicted RBP8.29□□□□□ -1.08
AC078927.1-201ENST00000539652 CCDC151A5D8V7 595 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 SERINC4A6NH21 518 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 OR6C65A6NJZ3 312 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 NPIPB9F8W1W9 429 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 GPR171O14626 319 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 KRT33AO76009 404 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 RSL1D1O76021 490 aaKnown RBP8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 CSTAP01040 98 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 ERCC1P07992 297 aaPredicted RBP8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 MSMBP08118 114 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 GSTA1P08263 222 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 SAGP10523 405 aaPredicted RBP8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 NPR2P20594 1047 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 IMPDH1P20839 514 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 MPGP29372 298 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 LCN1P31025 176 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 SOAT1P35610 550 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 GPR6P46095 362 aaPredicted RBP8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 ASMTP46597 345 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 CAV1Q03135 178 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 TGFBR3Q03167 851 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 HGFACQ04756 655 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 NPRL3Q12980 569 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 PDK3Q15120 406 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 EFNB3Q15768 340 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 HIST2H2BDQ6DRA6 164 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 KRT80Q6KB66 452 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 TRIM46Q7Z4K8 759 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 CLEC4FQ8N1N0 589 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 ZDHHC22Q8N966 263 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 C1orf162Q8NEQ5 155 aaPredicted RBP8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 SPATA4Q8NEY3 305 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 OR7A2PQ8NGA2 310 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 OR2T11Q8NH01 316 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 DCAKDQ8WVC6 231 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 CKAP2Q8WWK9 683 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 NEU4Q8WWR8 484 aaPredicted RBP8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 ARL8AQ96BM9 186 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 ITPKCQ96DU7 683 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 AURKBQ96GD4 344 aaPredicted RBP8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 OR7D2Q96RA2 312 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 STACQ99469 402 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 OCSTAMPQ9BR26 566 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 ZNF747Q9BV97 191 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 ACTRT3Q9BYD9 372 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 HOXD1Q9GZZ0 328 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 SAP130Q9H0E3 1048 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 CDC42EP4Q9H3Q1 356 aaKnown RBP8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 DUSP22Q9NRW4 184 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 GIMAP2Q9UG22 337 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 MKLN1Q9UL63 735 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 FAF1Q9UNN5 650 aaPredicted RBP8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 SLC9A8Q9Y2E8 581 aa8.28□□□□□ -1.08
AC078927.1-201ENST00000539652 TMEM129A0AVI4 362 aa8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 EIF4E2O60573 245 aaKnown RBP8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 FCMRO60667 390 aa8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 PMS2P2O95744 297 aa8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 HSPA4LO95757 839 aa8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 PNPP00491 289 aa8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 HPXP02790 462 aa8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 IFI6P09912 130 aa8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 GAAP10253 952 aa8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 IMPDH2P12268 514 aa8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 SNRPBP14678 240 aaKnown RBP8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 ATP5F1P24539 256 aaPredicted RBP8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 COL8A2P25067 703 aa8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 FRKP42685 505 aaPredicted RBP8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 CCT3P49368 545 aaKnown RBP8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 SERPINB9P50453 376 aa8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 ARFIP2P53365 341 aa8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 SLC16A1P53985 500 aa8.27□□□□□ -1.09
AC078927.1-201ENST00000539652 PRKAA2P54646 552 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms