RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 ZNF16P17020 682 aaPredicted RBP17.55■□□□□ 0.4
HDAC2-207ENST00000520170 USF1P22415 310 aaPredicted RBP17.55■□□□□ 0.4
HDAC2-207ENST00000520170 SERPINB5P36952 375 aa17.55■□□□□ 0.4
HDAC2-207ENST00000520170 IDH2P48735 452 aaKnown RBP17.55■□□□□ 0.4
HDAC2-207ENST00000520170 CLK1P49759 484 aaKnown RBP17.55■□□□□ 0.4
HDAC2-207ENST00000520170 EFNA4P52798 201 aa17.55■□□□□ 0.4
HDAC2-207ENST00000520170 EMX2Q04743 252 aa17.55■□□□□ 0.4
HDAC2-207ENST00000520170 EMBQ6PCB8 327 aa17.55■□□□□ 0.4
HDAC2-207ENST00000520170 ANKRD46Q86W74 232 aa17.55■□□□□ 0.4
HDAC2-207ENST00000520170 ARFGAP2Q8N6H7 521 aa17.55■□□□□ 0.4
HDAC2-207ENST00000520170 MIPOL1Q8TD10 442 aa17.55■□□□□ 0.4
HDAC2-207ENST00000520170 PROX1Q92786 737 aa17.55■□□□□ 0.4
HDAC2-207ENST00000520170 SLC7A10Q9NS82 523 aa17.55■□□□□ 0.4
HDAC2-207ENST00000520170 TMEM160Q9NX00 188 aa17.55■□□□□ 0.4
HDAC2-207ENST00000520170 TMEM181Q9P2C4 612 aa17.55■□□□□ 0.4
HDAC2-207ENST00000520170 LPAR3Q9UBY5 353 aa17.55■□□□□ 0.4
HDAC2-207ENST00000520170 PMF1-BGLAPU3KQ54 211 aa17.55■□□□□ 0.4
HDAC2-207ENST00000520170 TMED7-TICAM2A0A0A6YYA0 188 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 CLDN24A6NM45 220 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 CSF3P09919 207 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 FKBP2P26885 142 aaKnown RBP17.54■□□□□ 0.4
HDAC2-207ENST00000520170 APOBEC3AP31941 199 aaPredicted RBP17.54■□□□□ 0.4
HDAC2-207ENST00000520170 KCNJ10P78508 379 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 LSM11P83369 360 aaKnown RBP eCLIP17.54■□□□□ 0.4
HDAC2-207ENST00000520170 FUT5Q11128 374 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 KRTAP24-1Q3LI83 254 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 GPAT3Q53EU6 434 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 FRRS1Q6ZNA5 592 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 ARIH2OSQ8N7S6 290 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 SAP130Q9H0E3 1048 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 SLC17A5Q9NRA2 495 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 POLE3Q9NRF9 147 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.54■□□□□ 0.4
HDAC2-207ENST00000520170 PARPBPQ9NWS1 579 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 TRAPPC4Q9Y296 219 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 AMDHD2Q9Y303 409 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 TMED7Q9Y3B3 224 aa17.54■□□□□ 0.4
HDAC2-207ENST00000520170 NBEAL1Q6ZS30 2694 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 PDLIM1O00151 329 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 AP3D1O14617 1153 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 LMX1BO60663 402 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 F12P00748 615 aaPredicted RBP17.53■□□□□ 0.4
HDAC2-207ENST00000520170 UQCRC2P22695 453 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 H3F3AP84243 136 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 SLC25A3Q00325 362 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 TSPO2Q5TGU0 170 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 OR8J2Q8NGG1 315 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 OIT3Q8WWZ8 545 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 CNOT9Q92600 299 aaKnown RBP17.53■□□□□ 0.4
HDAC2-207ENST00000520170 FBXO17Q96EF6 278 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 NAA11Q9BSU3 229 aaPredicted RBP17.53■□□□□ 0.4
HDAC2-207ENST00000520170 DPY30Q9C005 99 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 EXOSC3Q9NQT5 275 aaKnown RBP17.53■□□□□ 0.4
HDAC2-207ENST00000520170 ASIC5Q9NY37 505 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 DCTN4Q9UJW0 460 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 SLC9A8Q9Y2E8 581 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 FLVCR1Q9Y5Y0 555 aa17.53■□□□□ 0.4
HDAC2-207ENST00000520170 ATP6V1G2-DDX39BF2Z307 99 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 BPGMP07738 259 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 GUSBP08236 651 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 CDH2P19022 906 aaPredicted RBP17.52■□□□□ 0.4
HDAC2-207ENST00000520170 CHI3L1P36222 383 aaPredicted RBP17.52■□□□□ 0.4
HDAC2-207ENST00000520170 KHKP50053 298 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 PHC1P78364 1004 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 SLC35A1P78382 337 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 HPCAP84074 193 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 TGFBR3Q03167 851 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 PLAURQ03405 335 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 GGTLC2Q14390 218 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 PDCD2Q16342 344 aaPredicted RBP17.52■□□□□ 0.4
HDAC2-207ENST00000520170 SAXO2Q658L1 398 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 RIBC1Q8N443 379 aaPredicted RBP17.52■□□□□ 0.4
HDAC2-207ENST00000520170 C17orf78Q8N4C9 275 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 C1orf162Q8NEQ5 155 aaPredicted RBP17.52■□□□□ 0.4
HDAC2-207ENST00000520170 DDIT4LQ96D03 193 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 AMBRA1Q9C0C7 1298 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 AKTIPQ9H8T0 292 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 MOKQ9UQ07 419 aa17.52■□□□□ 0.4
HDAC2-207ENST00000520170 PRSS51A0A1B0GVH4 220 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 TMEM72A0PK05 275 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 EIF1BO60739 113 aaKnown RBP17.51■□□□□ 0.39
HDAC2-207ENST00000520170 SCN2BO60939 215 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 IMPDH2P12268 514 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 HTR3AP46098 478 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 GZMKP49863 264 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 POLR2HP52434 150 aaKnown RBP17.51■□□□□ 0.39
HDAC2-207ENST00000520170 PRPS1P60891 318 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 SRSF2Q01130 221 aaKnown RBP17.51■□□□□ 0.39
HDAC2-207ENST00000520170 SMU1Q2TAY7 513 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 ANXA8L1Q5VT79 327 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 KLHL24Q6TFL4 600 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 IL17RELQ6ZVW7 336 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 VPS37AQ8NEZ2 397 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 PMM1Q92871 262 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 CHODLQ9H9P2 273 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 MARCOQ9UEW3 520 aaPredicted RBP17.51■□□□□ 0.39
HDAC2-207ENST00000520170 OSGIN1Q9UJX0 560 aa17.51■□□□□ 0.39
HDAC2-207ENST00000520170 ZC3H12DA2A288 527 aaKnown RBP17.5■□□□□ 0.39
HDAC2-207ENST00000520170 PRAMEF27A3QJZ7 478 aa17.5■□□□□ 0.39
HDAC2-207ENST00000520170 ITM2AO43736 263 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms