RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 SLC9A8Q9Y2E8 581 aa17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 NUP214P35658 2090 aaPredicted RBP17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 A0A0A6YYJ9 748 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 SLCO1B7G3V0H7 640 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 AZIN1O14977 448 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 CRYAAP02489 173 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 HPCAL1P37235 193 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 DVL1P1P54792 670 aaPredicted RBP17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 TUBA1BP68363 451 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 TUBA4AP68366 448 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 H3F3AP84243 136 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 LGALS3BPQ08380 585 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 EFNB3Q15768 340 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 TUBA1AQ71U36 451 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 EIF3MQ7L2H7 374 aaKnown RBP17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 CLEC4FQ8N1N0 589 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 PSMA8Q8TAA3 256 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 TSPYL1Q9H0U9 437 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 SERHL2Q9H4I8 314 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 SEC61A2Q9H9S3 476 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 TMEM181Q9P2C4 612 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 DCDC2Q9UHG0 476 aa17.64■□□□□ 0.41
SQSTM1-215ENST00000514093 SH3PXD2BA1X283 911 aa17.63■□□□□ 0.41
SQSTM1-215ENST00000514093 TMEM89A2RUT3 159 aa17.63■□□□□ 0.41
SQSTM1-215ENST00000514093 NR5A2O00482 541 aa17.63■□□□□ 0.41
SQSTM1-215ENST00000514093 DNPH1O43598 174 aa17.63■□□□□ 0.41
SQSTM1-215ENST00000514093 IFNGR1P15260 489 aa17.63■□□□□ 0.41
SQSTM1-215ENST00000514093 ECHS1P30084 290 aa17.63■□□□□ 0.41
SQSTM1-215ENST00000514093 PGM1P36871 562 aa17.63■□□□□ 0.41
SQSTM1-215ENST00000514093 SLC17A1Q14916 467 aa17.63■□□□□ 0.41
SQSTM1-215ENST00000514093 THSD4Q6ZMP0 1018 aa17.63■□□□□ 0.41
SQSTM1-215ENST00000514093 HMGN2P46Q86SG4 172 aa17.63■□□□□ 0.41
SQSTM1-215ENST00000514093 AURKBQ96GD4 344 aaPredicted RBP17.63■□□□□ 0.41
SQSTM1-215ENST00000514093 TBK1Q9UHD2 729 aa17.63■□□□□ 0.41
SQSTM1-215ENST00000514093 TMED5Q9Y3A6 229 aa17.63■□□□□ 0.41
SQSTM1-215ENST00000514093 A0A1W2PPM1 405 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 hCG_2039718K7EN88 272 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 ANKRD28O15084 1053 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 CFLARO15519 480 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 STX11O75558 287 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 PROCP04070 461 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 NEFHP12036 1026 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 IMPDH2P12268 514 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 MATN1P21941 496 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 CALCRP30988 508 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 SOAT1P35610 550 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 SLC1A3P43003 542 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 DNAJB13P59910 316 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 NAA20P61599 178 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 NAAAQ02083 359 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 RIN1Q13671 783 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 PTGR1Q14914 329 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 TBRG1Q3YBR2 411 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 ANKRD16Q6P6B7 361 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 SYT10Q6XYQ8 523 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 GRINAQ7Z429 371 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 ZNF786Q8N393 782 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 SVOPLQ8N434 492 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 ACMSDQ8TDX5 336 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 WDR60Q8WVS4 1066 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 NEU4Q8WWR8 484 aaPredicted RBP17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 KATNB1Q9BVA0 655 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 LPAR2Q9HBW0 351 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 TRAPPC4Q9Y296 219 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 DNAJC15Q9Y5T4 150 aa17.62■□□□□ 0.41
SQSTM1-215ENST00000514093 PDE5AO76074 875 aa17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 URI1O94763 535 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 LGI1O95970 557 aa17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 CECR9P0C854 216 aa17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 DDX5P17844 614 aaKnown RBP17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 THBS4P35443 961 aa17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 SLC35A1P78382 337 aa17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 LSM12Q3MHD2 195 aaKnown RBP17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 AAED1Q7RTV5 226 aa17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 DDIASQ8IXT1 998 aa17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 ZIC4Q8N9L1 334 aa17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 SFXN5Q8TD22 340 aa17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 UBASH3BQ8TF42 649 aa17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 ZNF385AQ96PM9 386 aaKnown RBP17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 DOK1Q99704 481 aa17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 NAA11Q9BSU3 229 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 OXSMQ9NWU1 459 aa17.61■□□□□ 0.41
SQSTM1-215ENST00000514093 TMEM72A0PK05 275 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 CLDN24A6NM45 220 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 TMEM233B4DJY2 109 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 IGFBP1P08833 259 aaPredicted RBP17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 PCMT1P22061 227 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 IDH2P48735 452 aaKnown RBP17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 CLK1P49759 484 aaKnown RBP17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 HBA1P69905 142 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 HGFACQ04756 655 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 ADRM1Q16186 407 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 ARHGAP11BQ3KRB8 267 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 C1QTNF12Q5T7M4 302 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 EMBQ6PCB8 327 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 DEF8Q6ZN54 512 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 C6orf120Q7Z4R8 191 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 SPATA21Q7Z572 469 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 PEG10Q86TG7 708 aaKnown RBP17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 GLCCI1Q86VQ1 547 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms