RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 EDARQ9UNE0 448 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 ARID1AO14497 2285 aa9.39□□□□□ -0.91
NELFE-213ENST00000494956 A0A096LPI6 279 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 ZNF724A8MTY0 619 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 CLOCKO15516 846 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 SMPD2O60906 423 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 H2AFXP16104 143 aaPredicted RBP9.38□□□□□ -0.91
NELFE-213ENST00000494956 PPP3CBP16298 524 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 SLC1A3P43003 542 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 MRPL19P49406 292 aaKnown RBP9.38□□□□□ -0.91
NELFE-213ENST00000494956 STX1BP61266 288 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 ITGADQ13349 1161 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 LIN52Q52LA3 116 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 AGKQ53H12 422 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 C9orf135Q5VTT2 229 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 BLOC1S3Q6QNY0 202 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 Q6ZT83 130 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 HDXQ7Z353 690 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 GALNT5Q7Z7M9 940 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 ZNF100Q8IYN0 542 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 STEAP2Q8NFT2 490 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 OR52E4Q8NGH9 312 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 NFKBIDQ8NI38 313 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 CKAP2Q8WWK9 683 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 OIT3Q8WWZ8 545 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 SPDL1Q96EA4 605 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 CCDC28BQ9BUN5 200 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 REPIN1Q9BWE0 567 aaKnown RBP9.38□□□□□ -0.91
NELFE-213ENST00000494956 PRR14Q9BWN1 585 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 ADAM19Q9H013 955 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 GP6Q9HCN6 339 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 BEX4Q9NWD9 120 aaPredicted RBP9.38□□□□□ -0.91
NELFE-213ENST00000494956 TMEM181Q9P2C4 612 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 DCTN4Q9UJW0 460 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 NOSIPQ9Y314 301 aaKnown RBP9.38□□□□□ -0.91
NELFE-213ENST00000494956 HDGFL3Q9Y3E1 203 aa9.38□□□□□ -0.91
NELFE-213ENST00000494956 SPIN1Q9Y657 262 aaPredicted RBP9.38□□□□□ -0.91
NELFE-213ENST00000494956 CADP27708 2225 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 IGKV3D-15A0A087WSY6 115 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 DPRXA6NFQ7 191 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 TPST1O60507 370 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 RAD51DO75771 328 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 AKR7A3O95154 331 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 PGM3O95394 542 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 TGDSO95455 350 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 PTNP21246 168 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 TXNL4AP83876 142 aaKnown RBP9.37□□□□□ -0.91
NELFE-213ENST00000494956 H3F3AP84243 136 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 CEACAM7Q14002 265 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 OR7A5Q15622 319 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 GLIPR1L2Q4G1C9 344 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 ZNF311Q5JNZ3 666 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 Q5PR19 223 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 NCMAPQ5T1S8 102 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 LRIF1Q5T3J3 769 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 UBE2J2Q8N2K1 259 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 CIARTQ8N365 385 aaPredicted RBP9.37□□□□□ -0.91
NELFE-213ENST00000494956 ZNF433Q8N7K0 673 aaPredicted RBP9.37□□□□□ -0.91
NELFE-213ENST00000494956 TMEM99Q8N816 258 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 KBTBD8Q8NFY9 601 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 AKAP1Q92667 903 aaKnown RBP eCLIP9.37□□□□□ -0.91
NELFE-213ENST00000494956 DDIT4LQ96D03 193 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 WFDC6Q9BQY6 131 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 TACO1Q9BSH4 297 aaKnown RBP9.37□□□□□ -0.91
NELFE-213ENST00000494956 TMEM204Q9BSN7 226 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 SPATA9Q9BWV2 254 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 A4GALTQ9NPC4 353 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 NPAP1Q9NZP6 1156 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 FLVCR1Q9Y5Y0 555 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 USF3Q68DE3 2245 aa9.37□□□□□ -0.91
NELFE-213ENST00000494956 TRBV5-3A0A0A0MS03 114 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 A0A0G2JPF8 293 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 HMGB1P1B2RPK0 211 aaPredicted RBP9.36□□□□□ -0.91
NELFE-213ENST00000494956 HNRNPCL2B2RXH8 293 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 HNRNPCL3B7ZW38 293 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 FAAHO00519 579 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 HS3ST1O14792 307 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 ZNF208O43345 1280 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 HNRNPCL1O60812 293 aaKnown RBP9.36□□□□□ -0.91
NELFE-213ENST00000494956 ITGA5P08648 1049 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 HNRNPCL4P0DMR1 293 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 ARAFP10398 606 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 NCF2P19878 526 aaPredicted RBP9.36□□□□□ -0.91
NELFE-213ENST00000494956 CXCR1P25024 350 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 AQP1P29972 269 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 MAGEA8P43361 318 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 HTR3AP46098 478 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 BSPH1Q075Z2 132 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 LGALS3BPQ08380 585 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 SPOCK1Q08629 439 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 FAPQ12884 760 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 SELPLGQ14242 412 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 GNA13Q14344 377 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 LARS2Q15031 903 aaKnown RBP9.36□□□□□ -0.91
NELFE-213ENST00000494956 P2RY6Q15077 328 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 OTUD3Q5T2D3 398 aaPredicted RBP9.36□□□□□ -0.91
NELFE-213ENST00000494956 FBXW9Q5XUX1 488 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 ADAM5Q6NVV9 412 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 CASP12Q6UXS9 341 aa9.36□□□□□ -0.91
NELFE-213ENST00000494956 RETREG3Q86VR2 466 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms