RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 KLK7P49862 253 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 PRKXP51817 358 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 TDGF1P3P51864 188 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 DLX1P56177 255 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 SLC26A5P58743 744 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 GABPB1Q06547 395 aaPredicted RBP0.87□□□□□ -2.27
CCDC93-209ENST00000488908 ACTN3Q08043 901 aaPredicted RBP0.87□□□□□ -2.27
CCDC93-209ENST00000488908 SRSF5Q13243 272 aaKnown RBP0.87□□□□□ -2.27
CCDC93-209ENST00000488908 SNTB2Q13425 540 aaKnown RBP0.87□□□□□ -2.27
CCDC93-209ENST00000488908 LASP1Q14847 261 aaKnown RBP0.87□□□□□ -2.27
CCDC93-209ENST00000488908 PSG5Q15238 335 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 CHI3L2Q15782 390 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 WDR88Q6ZMY6 472 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 ZNF621Q6ZSS3 439 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 CENPUQ71F23 418 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 RALGPS2Q86X27 583 aaPredicted RBP0.87□□□□□ -2.27
CCDC93-209ENST00000488908 CCDC54Q8NEL0 328 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 OR10G3Q8NGC4 313 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 OR56B1Q8NGI3 324 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 OR10G9Q8NGN4 311 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 PNPT1Q8TCS8 783 aaKnown RBP0.87□□□□□ -2.27
CCDC93-209ENST00000488908 MCOLN3Q8TDD5 553 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 PAQR8Q8TEZ7 354 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 TMEM186Q96B77 213 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 HPDLQ96IR7 371 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 AKR1E2Q96JD6 320 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 CABS1Q96KC9 395 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 TAAR1Q96RJ0 339 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 RUFY1Q96T51 708 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 NDFIP1Q9BT67 221 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 SYTL2Q9HCH5 934 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 ZNF226Q9NYT6 803 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 SLC25A37Q9NYZ2 338 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 CNOT2Q9NZN8 540 aaKnown RBP0.87□□□□□ -2.27
CCDC93-209ENST00000488908 DEC1Q9P2X7 70 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 SH3TC1Q8TE82 1336 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 CABIN1Q9Y6J0 2220 aa0.87□□□□□ -2.27
CCDC93-209ENST00000488908 CUX2O14529 1486 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 CARMIL3Q8ND23 1372 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 IGHV1OR21-1A0A087WYE8 117 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 FAM230AA0A1W2PPH8 454 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 KIF2AO00139 706 aaPredicted RBP0.86□□□□□ -2.27
CCDC93-209ENST00000488908 DDX39AO00148 427 aaKnown RBP0.86□□□□□ -2.27
CCDC93-209ENST00000488908 AGPAT2O15120 278 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 STX7O15400 261 aaKnown RBP0.86□□□□□ -2.27
CCDC93-209ENST00000488908 TOM1L1O75674 476 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 TNFSF13O75888 250 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 ADCY5O95622 1261 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 LGI1O95970 557 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 PPIAL4GP0DN37 164 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 HPGDP15428 266 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 CYP2B6P20813 491 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 ATP6V1B2P21281 511 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 CMA1P23946 247 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 PSMA2P25787 234 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 NPY1RP25929 384 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 ADSSP30520 456 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 GDI1P31150 447 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 KIF5BP33176 963 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 CYLC1P35663 651 aaPredicted RBP0.86□□□□□ -2.27
CCDC93-209ENST00000488908 MAGEA5P43359 124 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 BDKRB1P46663 353 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 UBE2AP49459 152 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 CRISP3P54108 245 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 TGFBR3Q03167 851 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 CBX3Q13185 183 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 PPP2R5CQ13362 524 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 TMEM52BQ4KMG9 183 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 PARP10Q53GL7 1025 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 LRRC10Q5BKY1 277 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 OR6B2Q6IFH4 312 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 FRMPD2BQ6IN97 320 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 TPRA1Q86W33 373 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 FTMTQ8N4E7 242 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 MINDY2Q8NBR6 621 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 OR52E1Q8NGJ3 308 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 OR56B4Q8NH76 319 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 FANK1Q8TC84 345 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 DTX3LQ8TDB6 740 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 ST8SIA1Q92185 356 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 RAPGEF5Q92565 580 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 RPL3LQ92901 407 aaKnown RBP0.86□□□□□ -2.27
CCDC93-209ENST00000488908 MYLPFQ96A32 169 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 ASB9Q96DX5 294 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 C14orf79Q96F83 325 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 VPS35Q96QK1 796 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 P2RY13Q9BPV8 354 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 CDC42EP4Q9H3Q1 356 aaKnown RBP0.86□□□□□ -2.27
CCDC93-209ENST00000488908 ZNF430Q9H8G1 570 aaPredicted RBP0.86□□□□□ -2.27
CCDC93-209ENST00000488908 ROPN1Q9HAT0 212 aaPredicted RBP0.86□□□□□ -2.27
CCDC93-209ENST00000488908 TM9SF3Q9HD45 589 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 SIRT7Q9NRC8 400 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 SMPD3Q9NY59 655 aaPredicted RBP0.86□□□□□ -2.27
CCDC93-209ENST00000488908 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.86□□□□□ -2.27
CCDC93-209ENST00000488908 IL19Q9UHD0 177 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 FOXJ3Q9UPW0 622 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 TRAPPC4Q9Y296 219 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 ATP10DQ9P241 1426 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 ABCC4O15439 1325 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 UBE4BO95155 1302 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms