RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 EPXP11678 715 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 NUDT1P36639 197 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 TAS2R43P59537 309 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 TAGLNQ01995 201 aaKnown RBP11.76□□□□□ -0.53
VPS52-218ENST00000482399 CAMK2DQ13557 499 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 DEFB110Q30KQ9 67 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 NDUFAF7Q7L592 441 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 OR5T3Q8NGG3 340 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 RBP7Q96R05 134 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 LMF1Q96S06 567 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 C19orf43Q9BQ61 176 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 ULBP3Q9BZM4 244 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 COPZ2Q9P299 210 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 RWDD3Q9Y3V2 267 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 A0A0A6YYD5 115 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 B3GALT2O43825 422 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 IFNA16P05015 189 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 GTF2F2P13984 249 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 AKR1C2P52895 323 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 GMFBP60983 142 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 AKR1C1Q04828 323 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 SRSF5Q13243 272 aaKnown RBP11.75□□□□□ -0.53
VPS52-218ENST00000482399 MELKQ14680 651 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 MFSD12Q6NUT3 480 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 TMEM65Q6PI78 240 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 CD200R1LQ6Q8B3 271 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 BTN2A1Q7KYR7 527 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 METTL27Q8N6F8 245 aaPredicted RBP11.75□□□□□ -0.53
VPS52-218ENST00000482399 SCMH1Q96GD3 660 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 MS4A4EQ96PG1 132 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 ISYNA1Q9NPH2 558 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 MED11Q9P086 117 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 WDR87Q6ZQQ6 2873 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 VCANP13611 3396 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 PDCD5O14737 125 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 LILRB5O75023 590 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 DNAJB6O75190 326 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 ZGLP1P0C6A0 271 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 NFYAP23511 347 aaPredicted RBP11.75□□□□□ -0.53
VPS52-218ENST00000482399 SLC6A6P31641 620 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 HSD17B2P37059 387 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 RPL35P42766 123 aaKnown RBP11.75□□□□□ -0.53
VPS52-218ENST00000482399 VASPP50552 380 aaPredicted RBP11.75□□□□□ -0.53
VPS52-218ENST00000482399 SIRPAP78324 504 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 FAM74A1Q5RGS3 127 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 DCST2Q5T1A1 773 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 METRNLQ641Q3 311 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 ENPP7Q6UWV6 458 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 CD300LDQ6UXZ3 194 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 WDR88Q6ZMY6 472 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 ZNF627Q7L945 461 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 GLRX5Q86SX6 157 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 SHISA5Q8N114 240 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 CNN2Q99439 309 aaKnown RBP11.75□□□□□ -0.53
VPS52-218ENST00000482399 TRAF4Q9BUZ4 470 aaPredicted RBP11.75□□□□□ -0.53
VPS52-218ENST00000482399 PPA2Q9H2U2 334 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 HRASLSQ9HDD0 168 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 A0A1B0GTH9 108 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 GXYLT2A0PJZ3 443 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 ELOA3DA6NLF2 546 aaPredicted RBP11.75□□□□□ -0.53
VPS52-218ENST00000482399 PRICKLE3O43900 615 aaPredicted RBP11.75□□□□□ -0.53
VPS52-218ENST00000482399 ZNF35P13682 527 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 MNDAP41218 407 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 ELOA3BQ3SY89 546 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 TMEM35AQ53FP2 167 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 VASNQ6EMK4 673 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 LRRN1Q6UXK5 716 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 YAF2Q8IY57 180 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 ELOA3Q8NG57 546 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 OR2L3Q8NG85 312 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 OR6M1Q8NGM8 313 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 OR5M1Q8NGP8 315 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 RERGQ96A58 199 aaPredicted RBP11.75□□□□□ -0.53
VPS52-218ENST00000482399 SDF2Q99470 211 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 ACTR6Q9GZN1 396 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 SLC6A17Q9H1V8 727 aa11.75□□□□□ -0.53
VPS52-218ENST00000482399 SYT5O00445 386 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 THY1P04216 161 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 HIST1H1CP16403 213 aaKnown RBP11.74□□□□□ -0.53
VPS52-218ENST00000482399 CCR9P51686 369 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 SORDQ00796 357 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 GAS6Q14393 721 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 LINC00303Q3SY05 128 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 TMEM31Q5JXX7 168 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 METTL11BQ5VVY1 283 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 CNKSR3Q6P9H4 555 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 SLC35F2Q8IXU6 374 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 KCTD12Q96CX2 325 aaKnown RBP11.74□□□□□ -0.53
VPS52-218ENST00000482399 RASD2Q96D21 266 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 SGTBQ96EQ0 304 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 MNTQ99583 582 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 TMEM185BQ9H7F4 350 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 CA10Q9NS85 328 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 SLCO1C1Q9NYB5 712 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 TAS2R3Q9NYW6 316 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 USP34Q70CQ2 3546 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 TRAV18A0A075B6X5 111 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 TEX51A0A1B0GUA7 166 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 RBBP9O75884 186 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 PAPLNO95428 1278 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms