RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 IGHV4-30-2A0A087WSY4 118 aa20.02■□□□□ 0.8
USP42-205ENST00000465073 A8MV72 311 aaPredicted RBP20.02■□□□□ 0.8
USP42-205ENST00000465073 BIRC5O15392 142 aa20.02■□□□□ 0.8
USP42-205ENST00000465073 CLNS1AP54105 237 aaKnown RBP20.02■□□□□ 0.8
USP42-205ENST00000465073 VSNL1P62760 191 aa20.02■□□□□ 0.8
USP42-205ENST00000465073 CHI3L2Q15782 390 aa20.02■□□□□ 0.8
USP42-205ENST00000465073 GABRA6Q16445 453 aa20.02■□□□□ 0.8
USP42-205ENST00000465073 CLEC2AQ6UVW9 174 aa20.02■□□□□ 0.8
USP42-205ENST00000465073 MUC15Q8N387 334 aa20.02■□□□□ 0.8
USP42-205ENST00000465073 DNAJA3Q96EY1 480 aa20.02■□□□□ 0.8
USP42-205ENST00000465073 PKNOX2Q96KN3 472 aa20.02■□□□□ 0.8
USP42-205ENST00000465073 TMEM109Q9BVC6 243 aa20.02■□□□□ 0.8
USP42-205ENST00000465073 REPIN1Q9BWE0 567 aaKnown RBP20.02■□□□□ 0.8
USP42-205ENST00000465073 WDR91A4D1P6 747 aa20.01■□□□□ 0.79
USP42-205ENST00000465073 CLDN24A6NM45 220 aa20.01■□□□□ 0.79
USP42-205ENST00000465073 EIF1BO60739 113 aaKnown RBP20.01■□□□□ 0.79
USP42-205ENST00000465073 CCNA2P20248 432 aa20.01■□□□□ 0.79
USP42-205ENST00000465073 RPL14P50914 215 aaKnown RBP20.01■□□□□ 0.79
USP42-205ENST00000465073 FABP6P51161 128 aa20.01■□□□□ 0.79
USP42-205ENST00000465073 SLC35A1P78382 337 aa20.01■□□□□ 0.79
USP42-205ENST00000465073 RAB35Q15286 201 aa20.01■□□□□ 0.79
USP42-205ENST00000465073 LRRC34Q8IZ02 419 aa20.01■□□□□ 0.79
USP42-205ENST00000465073 KIRREL3Q8IZU9 778 aa20.01■□□□□ 0.79
USP42-205ENST00000465073 CNOT9Q92600 299 aaKnown RBP20.01■□□□□ 0.79
USP42-205ENST00000465073 DDIT4LQ96D03 193 aa20.01■□□□□ 0.79
USP42-205ENST00000465073 TRNT1Q96Q11 434 aaKnown RBP20.01■□□□□ 0.79
USP42-205ENST00000465073 SLC35A5Q9BS91 424 aa20.01■□□□□ 0.79
USP42-205ENST00000465073 TMED7-TICAM2A0A0A6YYA0 188 aa20■□□□□ 0.79
USP42-205ENST00000465073 A0A1W2PR80 420 aa20■□□□□ 0.79
USP42-205ENST00000465073 FAM234BA2RU67 622 aa20■□□□□ 0.79
USP42-205ENST00000465073 PRAMEF27A3QJZ7 478 aa20■□□□□ 0.79
USP42-205ENST00000465073 M0R1B8 84 aa20■□□□□ 0.79
USP42-205ENST00000465073 PDLIM1O00151 329 aa20■□□□□ 0.79
USP42-205ENST00000465073 HMGN4O00479 90 aa20■□□□□ 0.79
USP42-205ENST00000465073 ZNF208O43345 1280 aa20■□□□□ 0.79
USP42-205ENST00000465073 ITGA5P08648 1049 aa20■□□□□ 0.79
USP42-205ENST00000465073 S100A3P33764 101 aa20■□□□□ 0.79
USP42-205ENST00000465073 POLR2HP52434 150 aaKnown RBP20■□□□□ 0.79
USP42-205ENST00000465073 MAP2K6P52564 334 aa20■□□□□ 0.79
USP42-205ENST00000465073 PLAURQ03405 335 aa20■□□□□ 0.79
USP42-205ENST00000465073 SPOCK1Q08629 439 aa20■□□□□ 0.79
USP42-205ENST00000465073 SPANXN4Q5MJ08 99 aa20■□□□□ 0.79
USP42-205ENST00000465073 C1QTNF12Q5T7M4 302 aa20■□□□□ 0.79
USP42-205ENST00000465073 ZNF544Q6NX49 715 aa20■□□□□ 0.79
USP42-205ENST00000465073 CASP12Q6UXS9 341 aa20■□□□□ 0.79
USP42-205ENST00000465073 HMGN2P46Q86SG4 172 aa20■□□□□ 0.79
USP42-205ENST00000465073 AENQ8WTP8 325 aaKnown RBP20■□□□□ 0.79
USP42-205ENST00000465073 TRIM44Q96DX7 344 aaPredicted RBP20■□□□□ 0.79
USP42-205ENST00000465073 CCDC115Q96NT0 180 aa20■□□□□ 0.79
USP42-205ENST00000465073 NAA11Q9BSU3 229 aaPredicted RBP20■□□□□ 0.79
USP42-205ENST00000465073 INPP5KQ9BT40 448 aa20■□□□□ 0.79
USP42-205ENST00000465073 AMBRA1Q9C0C7 1298 aa20■□□□□ 0.79
USP42-205ENST00000465073 UPB1Q9UBR1 384 aa20■□□□□ 0.79
USP42-205ENST00000465073 BTNL2Q9UIR0 455 aa20■□□□□ 0.79
USP42-205ENST00000465073 DCTN4Q9UJW0 460 aa20■□□□□ 0.79
USP42-205ENST00000465073 SLC9A8Q9Y2E8 581 aa20■□□□□ 0.79
USP42-205ENST00000465073 TMED7Q9Y3B3 224 aa20■□□□□ 0.79
USP42-205ENST00000465073 ANK3Q12955 4377 aaKnown RBP19.99■□□□□ 0.79
USP42-205ENST00000465073 AGAP5A6NIR3 686 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 E9PBE3 544 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 LBPP18428 481 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 FOXG1P55316 489 aaPredicted RBP19.99■□□□□ 0.79
USP42-205ENST00000465073 TXNL4AP83876 142 aaKnown RBP19.99■□□□□ 0.79
USP42-205ENST00000465073 TGFBR3Q03167 851 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 CHRFAM7AQ494W8 412 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 C17orf78Q8N4C9 275 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 WDR31Q8NA23 367 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 C1orf162Q8NEQ5 155 aaPredicted RBP19.99■□□□□ 0.79
USP42-205ENST00000465073 OR52E4Q8NGH9 312 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 C20orf27Q9GZN8 174 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 OSGIN1Q9UJX0 560 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 FLVCR1Q9Y5Y0 555 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 A0A096LNT2 108 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 ELOA3DA6NLF2 546 aaPredicted RBP19.99■□□□□ 0.79
USP42-205ENST00000465073 RNF212BA8MTL3 300 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 H7C417 338 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 FAAHO00519 579 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 AP3D1O14617 1153 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 GPRIN2O60269 458 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 BMP4P12644 408 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 SLC1A6P48664 564 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 ANXA11P50995 505 aaKnown RBP19.99■□□□□ 0.79
USP42-205ENST00000465073 ELOA3BQ3SY89 546 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 FAM174BQ3ZCQ3 159 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 B3GLCTQ6Y288 498 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 RNF130Q86XS8 419 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 ELOA3Q8NG57 546 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 TNFRSF13CQ96RJ3 184 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 SORT1Q99523 831 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 C1QTNF6Q9BXI9 259 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 SLC38A1Q9H2H9 487 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 MTHFD2LQ9H903 347 aaPredicted RBP19.99■□□□□ 0.79
USP42-205ENST00000465073 FKRPQ9H9S5 495 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 HAO1Q9UJM8 370 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 AMDHD2Q9Y303 409 aa19.99■□□□□ 0.79
USP42-205ENST00000465073 SLC1A3P43003 542 aa19.98■□□□□ 0.79
USP42-205ENST00000465073 LOXL1Q08397 574 aaPredicted RBP19.98■□□□□ 0.79
USP42-205ENST00000465073 GNA13Q14344 377 aa19.98■□□□□ 0.79
USP42-205ENST00000465073 SLC17A1Q14916 467 aa19.98■□□□□ 0.79
USP42-205ENST00000465073 SYPL1Q16563 259 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms