RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 SF3B6Q9Y3B4 125 aaKnown RBP3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 EMC9Q9Y3B6 208 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 MED31Q9Y3C7 131 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 PCDHGB5Q9Y5G0 923 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 PCDHGA6Q9Y5G7 932 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 SNX5Q9Y5X3 404 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 NPFFR2Q9Y5X5 522 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 B3GALT1Q9Y5Z6 326 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 CDH10Q9Y6N8 788 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 FAM186AA6NE01 2351 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 GVINP1Q7Z2Y8 2422 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 MPDZO75970 2070 aa3.63□□□□□ -1.83
HMGB1P37-201ENST00000439613 SDK2Q58EX2 2172 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 DMXL1Q9Y485 3027 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 A0A087WUJ7 227 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 IGHV1-45A0A0A0MS14 117 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 NSG1A0A0A6YYJ2 146 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 IGHV3-20A0A0C4DH32 117 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 IRGMA1A4Y4 181 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 EIF4E1BA6NMX2 242 aaKnown RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 EFCAB9A8MZ26 197 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 FAM47E-STBD1D6RA91 191 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 PROB1E7EW31 1015 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 PTGES3LE9PB15 166 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 STMND1H3BQB6 276 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC1A7O00341 560 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 HCRTR2O43614 444 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 RGS10O43665 173 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 CDC40O60508 579 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 HCN1O60741 890 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ICOSLGO75144 302 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 BCAS1O75363 584 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 TNFSF15O95150 251 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF205O95201 554 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 LYPD3O95274 346 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 HPP00738 406 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 TFAP2AP05549 437 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 UMODP07911 640 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 SMIM18P0DKX4 95 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 COX6A1P12074 109 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 GP1BBP13224 206 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 IFI30P13284 250 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ATP6V1B1P15313 513 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 JUNBP17275 347 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 BMP7P18075 431 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ITIH1P19827 911 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 TCN2P20062 427 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 TGM1P22735 817 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 CXCR1P25024 350 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 FKBP2P26885 142 aaKnown RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ITPKBP27987 946 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ELK4P28324 431 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 EPHA2P29317 976 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 RBMS1P29558 406 aaKnown RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 EVI2BP34910 448 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 GRK5P34947 590 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ETV5P41161 510 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ECI1P42126 302 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 OMPP47874 163 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 IDH2P48735 452 aaKnown RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 PCYT1AP49585 367 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 P2RX1P51575 399 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 CCR4P51679 360 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 MAP2K6P52564 334 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 SUMO3P55854 103 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 CDK5Q00535 292 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 MVKQ03426 396 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 C17orf67Q0P5P2 114 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 FOXD4Q12950 439 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 SNTA1Q13424 505 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 TUBA3CQ13748 450 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 CBFBQ13951 182 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 PCOLCEQ15113 449 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 CTU2Q2VPK5 515 aaKnown RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 BTBD16Q32M84 506 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZBED5Q49AG3 693 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 KLHL22Q53GT1 634 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ALG10BQ5I7T1 473 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 HES3Q5TGS1 186 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 FNDC7Q5VTL7 733 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 C12orf73Q69YU5 71 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC30A6Q6NXT4 461 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 JMJD6Q6NYC1 403 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 FAM199XQ6PEV8 388 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 BORAQ6PGQ7 559 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 SMARCD3Q6STE5 483 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 KIRREL2Q6UWL6 708 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 DHRS13Q6UX07 377 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 RTL4Q6ZR62 310 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRSS48Q7RTY5 328 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 MRGPREQ86SM8 312 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 RAB43Q86YS6 212 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 NKAIN4Q8IVV8 208 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ENTHD1Q8IYW4 607 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRR22Q8IZ63 422 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 NLGN4XQ8N0W4 816 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 GALNT15Q8N3T1 639 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 LILRB2Q8N423 598 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 FAM26EQ8N5C1 309 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 POGLUT1Q8NBL1 392 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms