RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ATP8B1O43520 1251 aa18.05■□□□□ 0.48
GTF3A-202ENST00000419181 NFYCQ13952 458 aa18.05■□□□□ 0.48
GTF3A-202ENST00000419181 SCARB2Q14108 478 aa18.05■□□□□ 0.48
GTF3A-202ENST00000419181 PDK3Q15120 406 aa18.05■□□□□ 0.48
GTF3A-202ENST00000419181 FBXW10Q5XX13 1052 aa18.05■□□□□ 0.48
GTF3A-202ENST00000419181 C22orf34Q6ZV56 151 aa18.05■□□□□ 0.48
GTF3A-202ENST00000419181 GABRG1Q8N1C3 465 aa18.05■□□□□ 0.48
GTF3A-202ENST00000419181 CADM2Q8N3J6 435 aa18.05■□□□□ 0.48
GTF3A-202ENST00000419181 ZHX1-C8orf76Q96EF9 292 aa18.05■□□□□ 0.48
GTF3A-202ENST00000419181 LIME1Q9H400 295 aa18.05■□□□□ 0.48
GTF3A-202ENST00000419181 ZNF226Q9NYT6 803 aa18.05■□□□□ 0.48
GTF3A-202ENST00000419181 IGKV3D-15A0A087WSY6 115 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 ZNF716A6NP11 495 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 FBP2O00757 339 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 SIAH2O43255 324 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 FRS3O43559 492 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 GCM2O75603 506 aaPredicted RBP18.04■□□□□ 0.48
GTF3A-202ENST00000419181 IMPDH2P12268 514 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 PSMB1P20618 241 aaKnown RBP18.04■□□□□ 0.48
GTF3A-202ENST00000419181 CRYGSP22914 178 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 SLC6A2P23975 617 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 MDH1P40925 334 aaKnown RBP18.04■□□□□ 0.48
GTF3A-202ENST00000419181 MTPNP58546 118 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 H3F3AP84243 136 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 SF3A3Q12874 501 aaKnown RBP eCLIP18.04■□□□□ 0.48
GTF3A-202ENST00000419181 SELPLGQ14242 412 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 ANKRD34AQ69YU3 496 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 DHRS4L2Q6PKH6 230 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 COMTD1Q86VU5 262 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 KRT73Q86Y46 540 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 PTOV1Q86YD1 416 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 HIPK4Q8NE63 616 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 SPATA5L1Q9BVQ7 753 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 SAR1AQ9NR31 198 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 CELSR1Q9NYQ6 3014 aa18.04■□□□□ 0.48
GTF3A-202ENST00000419181 A0A1W2PPR1 153 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 DEFB108AA8MXU0 73 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 ZNF814B7Z6K7 855 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 PPP3CBP16298 524 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 CXCR1P25024 350 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 OR3A2P47893 321 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 OR2B6P58173 313 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 SLC35A1P78382 337 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 POU4F3Q15319 338 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 TESK1Q15569 626 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 PIGXQ8TBF5 258 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 C3orf49Q96BT1 292 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 ZNF317Q96PQ6 595 aaPredicted RBP18.03■□□□□ 0.48
GTF3A-202ENST00000419181 POTEKPQ9BYX7 375 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 OR10A4Q9H209 315 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 KAT8Q9H7Z6 458 aaKnown RBP18.03■□□□□ 0.48
GTF3A-202ENST00000419181 PLEKHF2Q9H8W4 249 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 EMC3Q9P0I2 261 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 KLHL14Q9P2G3 628 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 ST6GALNAC2Q9UJ37 374 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 GPR52Q9Y2T5 361 aa18.03■□□□□ 0.48
GTF3A-202ENST00000419181 TPST1O60507 370 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 EIF1BO60739 113 aaKnown RBP18.02■□□□□ 0.48
GTF3A-202ENST00000419181 RAMP1O60894 148 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 THBDP07204 575 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 AQP1P29972 269 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 SLC16A1P53985 500 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 PCBP3P57721 371 aaKnown RBP18.02■□□□□ 0.48
GTF3A-202ENST00000419181 HOXC5Q00444 222 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 RBBP4Q09028 425 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 KLF10Q13118 480 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 CAPRIN1Q14444 709 aaKnown RBP18.02■□□□□ 0.48
GTF3A-202ENST00000419181 CYP51A1Q16850 503 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 TRMT5Q32P41 509 aaKnown RBP18.02■□□□□ 0.48
GTF3A-202ENST00000419181 PRR14LQ5THK1 2151 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 NET1Q7Z628 596 aaPredicted RBP18.02■□□□□ 0.48
GTF3A-202ENST00000419181 GALNT5Q7Z7M9 940 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 ATG4DQ86TL0 474 aaPredicted RBP18.02■□□□□ 0.48
GTF3A-202ENST00000419181 CXorf67Q86X51 503 aaPredicted RBP18.02■□□□□ 0.48
GTF3A-202ENST00000419181 CCDC103Q8IW40 242 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 C11orf65Q8NCR3 313 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 NINJ1Q92982 152 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 ZNF775Q96BV0 537 aaPredicted RBP18.02■□□□□ 0.48
GTF3A-202ENST00000419181 ZC3HAV1LQ96H79 300 aaKnown RBP18.02■□□□□ 0.48
GTF3A-202ENST00000419181 ZNF607Q96SK3 696 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 ACTR6Q9GZN1 396 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 C6orf203Q9P0P8 240 aaPredicted RBP18.02■□□□□ 0.48
GTF3A-202ENST00000419181 ANGPT4Q9Y264 503 aa18.02■□□□□ 0.48
GTF3A-202ENST00000419181 PRORSD1PA6NEY8 169 aa18.01■□□□□ 0.47
GTF3A-202ENST00000419181 A8MVM7 634 aa18.01■□□□□ 0.47
GTF3A-202ENST00000419181 TMEM229AB2RXF0 380 aa18.01■□□□□ 0.47
GTF3A-202ENST00000419181 FPR1P21462 350 aa18.01■□□□□ 0.47
GTF3A-202ENST00000419181 EDNRAP25101 427 aa18.01■□□□□ 0.47
GTF3A-202ENST00000419181 IDUAP35475 653 aa18.01■□□□□ 0.47
GTF3A-202ENST00000419181 BNIP2Q12982 314 aa18.01■□□□□ 0.47
GTF3A-202ENST00000419181 P2RY6Q15077 328 aa18.01■□□□□ 0.47
GTF3A-202ENST00000419181 GLIPR1L2Q4G1C9 344 aa18.01■□□□□ 0.47
GTF3A-202ENST00000419181 COQ5Q5HYK3 327 aa18.01■□□□□ 0.47
GTF3A-202ENST00000419181 Q6ZT83 130 aa18.01■□□□□ 0.47
GTF3A-202ENST00000419181 C10orf82Q8WW14 230 aa18.01■□□□□ 0.47
GTF3A-202ENST00000419181 F8P00451 2351 aa18.01■□□□□ 0.47
GTF3A-202ENST00000419181 LIPT2A6NK58 231 aa18■□□□□ 0.47
GTF3A-202ENST00000419181 FXYD1O00168 92 aa18■□□□□ 0.47
GTF3A-202ENST00000419181 GPR171O14626 319 aa18■□□□□ 0.47
GTF3A-202ENST00000419181 NPIPB7O75200 414 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms