RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 GCKP35557 465 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 FEN1P39748 380 aaKnown RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 FRKP42685 505 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 MAGEA8P43361 318 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 CCT3P49368 545 aaKnown RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ARHGDIAP52565 204 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 CRISP3P54108 245 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 AQP4P55087 323 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 TPD52P55327 224 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 CDK6Q00534 326 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 BNC1Q01954 994 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 FOLH1Q04609 750 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF155Q12901 538 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 GNA13Q14344 377 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 LASP1Q14847 261 aaKnown RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 NR1D2Q14995 579 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ANGPT1Q15389 498 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ATP6AP1Q15904 470 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 KRTAP27-1Q3LI81 207 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF528Q3MIS6 628 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF718Q3SXZ3 478 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 GPAT3Q53EU6 434 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 IFI44LQ53G44 452 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ATAD3BQ5T9A4 648 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 OGFRL1Q5TC84 451 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 GFI1BQ5VTD9 330 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 GARNL3Q5VVW2 1013 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 SAXO2Q658L1 398 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 GUSBP11Q6P575 273 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 TNFAIP8L2Q6P589 184 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ENPP6Q6UWR7 440 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZBTB49Q6ZSB9 765 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 EIF3MQ7L2H7 374 aaKnown RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 PRSS41Q7RTY9 318 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 C16orf62Q7Z3J2 963 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 C6orf120Q7Z4R8 191 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 PRSS42Q7Z5A4 293 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 GALNT10Q86SR1 603 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 PATL1Q86TB9 770 aaKnown RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 KMT5CQ86Y97 462 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 PTOV1Q86YD1 416 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZDHHC21Q8IVQ6 265 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 CA13Q8N1Q1 262 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 GHDCQ8N2G8 530 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 C10orf111Q8N326 155 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 DNAJC22Q8N4W6 341 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 METTL27Q8N6F8 245 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 EID2Q8N6I1 236 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 TEX45Q8NA69 505 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR5T3Q8NGG3 340 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR52E4Q8NGH9 312 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR9A2Q8NGT5 310 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR9A4Q8NGU2 314 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 BBS10Q8TAM1 723 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 STT3BQ8TCJ2 826 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 SPPL2AQ8TCT8 520 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 RASSF5Q8WWW0 418 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLCO4A1Q96BD0 722 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 NEURL3Q96EH8 262 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 MMABQ96EY8 250 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 CENPNQ96H22 339 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 PYURFQ96I23 114 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 AMDHD1Q96NU7 426 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 DGAT2Q96PD7 388 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 DUX5Q96PT3 197 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF607Q96SK3 696 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 CIB1Q99828 191 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 PELOQ9BRX2 385 aaKnown RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC25A33Q9BSK2 321 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 CHID1Q9BWS9 393 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR51I1Q9H343 314 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 CXorf56Q9H5V9 222 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 TMEM38AQ9H6F2 299 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 REEP1Q9H902 201 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM60AQ9NP50 221 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 A4GALTQ9NPC4 353 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 EQTNQ9NQ60 294 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 PRTFDC1Q9NRG1 225 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 DCAF13Q9NV06 445 aaKnown RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 OLAHQ9NV23 265 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 TAS2R7Q9NYW3 318 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 CALML5Q9NZT1 146 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 KIF17Q9P2E2 1029 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 GRHPRQ9UBQ7 328 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 SEC14L3Q9UDX4 400 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 MALT1Q9UDY8 824 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC13A4Q9UKG4 626 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 MRPS2Q9Y399 296 aaKnown RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ORC6Q9Y5N6 252 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC22A7Q9Y694 548 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 RALGAPA1Q6GYQ0 2036 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 SCN2AQ99250 2005 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ABCA7Q8IZY2 2146 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CDH23Q9H251 3354 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 A0A1B0GUV1 79 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 DUXAA6NLW8 204 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 H0YIG0 161 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 hCG_2039718K7EN88 272 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 EI24O14681 340 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 PGRMC2O15173 223 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms