RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 CALHM2Q9HA72 323 aa7.49□□□□□ -1.21
BRCC3-205ENST00000399026 PACSIN3Q9UKS6 424 aa7.49□□□□□ -1.21
BRCC3-205ENST00000399026 CLEC4AQ9UMR7 237 aa7.49□□□□□ -1.21
BRCC3-205ENST00000399026 TMED7Q9Y3B3 224 aa7.49□□□□□ -1.21
BRCC3-205ENST00000399026 A0A1W2PNV4 684 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 ZC3H12DA2A288 527 aaKnown RBP7.48□□□□□ -1.21
BRCC3-205ENST00000399026 PRORSD1PA6NEY8 169 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 GJE1A6NN92 205 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 HSPB2A8KAH6 182 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 DEAF1O75398 565 aaPredicted RBP7.48□□□□□ -1.21
BRCC3-205ENST00000399026 MFN2O95140 757 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 SYNGR4O95473 234 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 NPPAP01160 153 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 FESP07332 822 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 H2AFB1P0C5Y9 115 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 H2AFB2P0C5Z0 115 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 TFPIP10646 304 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 TNFRSF1BP20333 461 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 AGAP20933 346 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 CD247P20963 164 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 TIMP3P35625 211 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 ACAA2P42765 397 aaKnown RBP7.48□□□□□ -1.21
BRCC3-205ENST00000399026 SLC1A3P43003 542 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 GSK3BP49841 420 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 HCFC1P51610 2035 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 POLR2HP52434 150 aaKnown RBP7.48□□□□□ -1.21
BRCC3-205ENST00000399026 RGS8P57771 180 aaPredicted RBP7.48□□□□□ -1.21
BRCC3-205ENST00000399026 EEFSECP57772 596 aaKnown RBP7.48□□□□□ -1.21
BRCC3-205ENST00000399026 PSME3P61289 254 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 NCALDP61601 193 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 LIPEQ05469 1076 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 TFF3Q07654 80 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 BNIP2Q12982 314 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 SNTB1Q13884 538 aaKnown RBP7.48□□□□□ -1.21
BRCC3-205ENST00000399026 SF3B4Q15427 424 aaKnown RBP eCLIP7.48□□□□□ -1.216e-9■■■■■ 44.4
BRCC3-205ENST00000399026 HSPB2Q16082 182 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 ZNF239Q16600 458 aaKnown RBP7.48□□□□□ -1.21
BRCC3-205ENST00000399026 SYT14P1Q58G82 188 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 C8orf82Q6P1X6 216 aaPredicted RBP7.48□□□□□ -1.21
BRCC3-205ENST00000399026 VWA1Q6PCB0 445 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 HACD2Q6Y1H2 254 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 ZNF550Q7Z398 422 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 ARPINQ7Z6K5 226 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 SLC15A3Q8IY34 581 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 ZNF440Q8IYI8 595 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 MICU2Q8IYU8 434 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 RNF148Q8N7C7 305 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 CNEP1R1Q8N9A8 125 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 GPR32P1Q8NGA4 272 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 ROBO4Q8WZ75 1007 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 C3orf49Q96BT1 292 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 ARL5BQ96KC2 179 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 ZNF583Q96ND8 569 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 LRRC37BQ96QE4 947 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 TM9SF2Q99805 663 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 ARHGDIGQ99819 225 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 SH3GL1Q99961 368 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 SSBP4Q9BWG4 385 aaPredicted RBP7.48□□□□□ -1.21
BRCC3-205ENST00000399026 ARMC7Q9H6L4 198 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 EFCAB1Q9HAE3 211 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 STOML1Q9UBI4 398 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 CHRNA9Q9UGM1 479 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 TAGLN3Q9UI15 199 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 OSGIN1Q9UJX0 560 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 SLC13A4Q9UKG4 626 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 MCTS1Q9ULC4 181 aaKnown RBP7.48□□□□□ -1.21
BRCC3-205ENST00000399026 ZNF175Q9Y473 711 aa7.48□□□□□ -1.21
BRCC3-205ENST00000399026 INTS1Q8N201 2190 aaKnown RBP7.47□□□□□ -1.21
BRCC3-205ENST00000399026 MPDZO75970 2070 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 A0A1B0GWA3 101 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 M0QX08 132 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 FAAHO00519 579 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 NDUFAB1O14561 156 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 DVL2O14641 736 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 ADAMDEC1O15204 470 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 SERPINB7O75635 380 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 FCGR2AP12318 317 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 NCK1P16333 377 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 CTSSP25774 331 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 CPOXP36551 454 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 APOBEC1P41238 236 aaKnown RBP7.47□□□□□ -1.21
BRCC3-205ENST00000399026 DIO1P49895 249 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 DLX5P56178 289 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 COPZ1P61923 177 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 MXRA7P84157 204 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 SLC25A3Q00325 362 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 MYBPHQ13203 477 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 NPTX1Q15818 432 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 DUSP7Q16829 419 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 PDSS1Q5T2R2 415 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 INTS11Q5TA45 600 aaKnown RBP7.47□□□□□ -1.21
BRCC3-205ENST00000399026 WBP2NLQ6ICG8 309 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 ERICH5Q6P6B1 374 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 PATL1Q86TB9 770 aaKnown RBP7.47□□□□□ -1.21
BRCC3-205ENST00000399026 LUZP2Q86TE4 346 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 ADGRG3Q86Y34 549 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 RBM45Q8IUH3 476 aaKnown RBP7.47□□□□□ -1.21
BRCC3-205ENST00000399026 SLC30A8Q8IWU4 369 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 FITM2Q8N6M3 262 aa7.47□□□□□ -1.21
BRCC3-205ENST00000399026 ANKS4BQ8N8V4 417 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms