RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 FKBP9P1Q75LS8 142 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 LSRQ86X29 649 aaPredicted RBP17.22■□□□□ 0.35
HOXA9-202ENST00000396345 C9orf106Q8NAJ2 232 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 ELOA3Q8NG57 546 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 FNDC9Q8TBE3 224 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 RNF217Q8TC41 542 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 SLC47A1Q96FL8 570 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 HSH2DQ96JZ2 352 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 NSMCE2Q96MF7 247 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 PRRG4Q9BZD6 226 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 SAMD4AQ9UPU9 718 aaKnown RBP17.22■□□□□ 0.35
HOXA9-202ENST00000396345 HDGFL3Q9Y3E1 203 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 NCOA6Q14686 2063 aaPredicted RBP17.22■□□□□ 0.35
HOXA9-202ENST00000396345 A0A0G2JNJ9 132 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 HSPB2A8KAH6 182 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 A8MVM7 634 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 SULT2B1O00204 365 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 TOXO94900 526 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 CEACAM8P31997 349 aaPredicted RBP17.21■□□□□ 0.35
HOXA9-202ENST00000396345 RASSF2P50749 326 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 MYBPHQ13203 477 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 HSPB2Q16082 182 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 IFI44LQ53G44 452 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 MRGPRGQ86SM5 289 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 CCDC71Q8IV32 467 aaPredicted RBP17.21■□□□□ 0.35
HOXA9-202ENST00000396345 GEMIN6Q8WXD5 167 aaKnown RBP17.21■□□□□ 0.35
HOXA9-202ENST00000396345 SLC38A4Q969I6 547 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 CPNE4Q96A23 557 aaPredicted RBP17.21■□□□□ 0.35
HOXA9-202ENST00000396345 DNAJA3Q96EY1 480 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 CLPTM1LQ96KA5 538 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 ARL5BQ96KC2 179 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 SRXN1Q9BYN0 137 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 COQ3Q9NZJ6 369 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 Q9UFV3 132 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 RNF6Q9Y252 685 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 DOCK7Q96N67 2140 aa17.21■□□□□ 0.35
HOXA9-202ENST00000396345 ZC3H12DA2A288 527 aaKnown RBP17.2■□□□□ 0.34
HOXA9-202ENST00000396345 TRAPPC13A5PLN9 417 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 RCBTB2O95199 551 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 RNF224P0DH78 156 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 FCGR2AP12318 317 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 DIO1P49895 249 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 CDH12P55289 794 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 RAC3P60763 192 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 CSNK2A1P68400 391 aaPredicted RBP17.2■□□□□ 0.34
HOXA9-202ENST00000396345 TRIM25Q14258 630 aaKnown RBP17.2■□□□□ 0.34
HOXA9-202ENST00000396345 SWT1Q5T5J6 900 aaKnown RBP17.2■□□□□ 0.34
HOXA9-202ENST00000396345 ZNF808Q8N4W9 903 aaPredicted RBP17.2■□□□□ 0.34
HOXA9-202ENST00000396345 ADAMTS16Q8TE57 1224 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 ITLN2Q8WWU7 325 aaPredicted RBP17.2■□□□□ 0.34
HOXA9-202ENST00000396345 ASB5Q8WWX0 329 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 SDCCAG3Q96C92 435 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 POTEKPQ9BYX7 375 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 POLR2J2Q9GZM3 115 aaKnown RBP17.2■□□□□ 0.34
HOXA9-202ENST00000396345 POLR2J3Q9H1A7 115 aaKnown RBP17.2■□□□□ 0.34
HOXA9-202ENST00000396345 MUC13Q9H3R2 512 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 ACTR3BQ9P1U1 418 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 DOPEY1Q5JWR5 2465 aa17.2■□□□□ 0.34
HOXA9-202ENST00000396345 DNAJC8O75937 253 aaPredicted RBP17.19■□□□□ 0.34
HOXA9-202ENST00000396345 AQP8O94778 261 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 PRKD3O94806 890 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 PMS2P2O95744 297 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 IFNW1P05000 195 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 OR2B6P58173 313 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 TAS2R41P59536 307 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 ZNF239Q16600 458 aaKnown RBP17.19■□□□□ 0.34
HOXA9-202ENST00000396345 OR2A2Q6IF42 318 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 XKRXQ6PP77 449 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 TSPYL5Q86VY4 417 aaPredicted RBP17.19■□□□□ 0.34
HOXA9-202ENST00000396345 MED12LQ86YW9 2145 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 NAXEQ8NCW5 288 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 STK35Q8TDR2 534 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 ROBO4Q8WZ75 1007 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 ZFP3Q96NJ6 502 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 AMBRA1Q9C0C7 1298 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 TRAPPC4Q9Y296 219 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 MPDZO75970 2070 aa17.19■□□□□ 0.34
HOXA9-202ENST00000396345 A0A087WUJ7 227 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 CHP2O43745 196 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 NPIPB7O75200 414 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 THY1P04216 161 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 TMIGD3P0DMS9 266 aaPredicted RBP17.18■□□□□ 0.34
HOXA9-202ENST00000396345 IMPDH2P12268 514 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 AGAP20933 346 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 ENPP1P22413 925 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 CHRNB4P30926 498 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 IDUAP35475 653 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 C1orf140Q5VVS0 124 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 CYP2R1Q6VVX0 501 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 CCDC121Q6ZUS5 278 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 DHFR2Q86XF0 187 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 INTS12Q96CB8 462 aaKnown RBP17.18■□□□□ 0.34
HOXA9-202ENST00000396345 CCDC124Q96CT7 223 aaKnown RBP17.18■□□□□ 0.34
HOXA9-202ENST00000396345 ZHX1-C8orf76Q96EF9 292 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 SLC41A3Q96GZ6 507 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 RNF122Q9H9V4 155 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 SLC7A7Q9UM01 511 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 V9GYQ6 96 aa17.18■□□□□ 0.34
HOXA9-202ENST00000396345 IGHV3-15A0A0B4J1V0 119 aa17.17■□□□□ 0.34
HOXA9-202ENST00000396345 EBAG9O00559 213 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms