RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 MOAP1Q96BY2 351 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 MUS81Q96NY9 551 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 ZIM3Q96PE6 472 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 ASB6Q9NWX5 421 aa13.83□□□□□ -0.2
DDX55-202ENST00000354291 RGS16O15492 202 aaPredicted RBP13.82□□□□□ -0.2
DDX55-202ENST00000354291 CFLARO15519 480 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 C6orf47O95873 294 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 DAOP14920 347 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 EMX2Q04743 252 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 TP53BP2Q13625 1128 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 TRIP10Q15642 601 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 TOMM34Q15785 309 aaPredicted RBP13.82□□□□□ -0.2
DDX55-202ENST00000354291 KRT71Q3SY84 523 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 SHISA2Q6UWI4 295 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 TREML4Q6UXN2 200 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 GLCCI1Q86VQ1 547 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 RIMKLAQ8IXN7 391 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 KRTCAP2Q8N6L1 136 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 SFXN5Q8TD22 340 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 APH1AQ96BI3 265 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 OTUB1Q96FW1 271 aaPredicted RBP13.82□□□□□ -0.2
DDX55-202ENST00000354291 OR5B2Q96R09 309 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 ZNF747Q9BV97 191 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 RAB1BQ9H0U4 201 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 TAS2R16Q9NYV7 291 aa13.82□□□□□ -0.2
DDX55-202ENST00000354291 NOP53Q9NZM5 478 aaKnown RBP13.82□□□□□ -0.2
DDX55-202ENST00000354291 NOSIPQ9Y314 301 aaKnown RBP13.82□□□□□ -0.2
DDX55-202ENST00000354291 GPC6Q9Y625 555 aaPredicted RBP13.82□□□□□ -0.2
DDX55-202ENST00000354291 NUP214P35658 2090 aaPredicted RBP13.81□□□□□ -0.2
DDX55-202ENST00000354291 H3BNH8 94 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 BIRC5O15392 142 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 OIP5O43482 229 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 G6PDP11413 515 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 GIFP27352 417 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 CLDN8P56748 225 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 HILS1P60008 231 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 ZNF117Q03924 483 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 KLHL26Q53HC5 615 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 CBLN3Q6UW01 205 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 UGT2A3Q6UWM9 527 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 KIRREL3Q8IZU9 778 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 MRGPRX4Q96LA9 322 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 DUSP26Q9BV47 211 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 LPAR2Q9HBW0 351 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 SSU72Q9NP77 194 aaKnown RBP13.81□□□□□ -0.2
DDX55-202ENST00000354291 GPATCH2Q9NW75 528 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 HIF1ANQ9NWT6 349 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 ASIC5Q9NY37 505 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 EMC3Q9P0I2 261 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 CARD8Q9Y2G2 431 aa13.81□□□□□ -0.2
DDX55-202ENST00000354291 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.81□□□□□ -0.2
DDX55-202ENST00000354291 B4DSR2 109 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 B9A039 149 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 TM9SF1O15321 606 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 SERPINE1P05121 402 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 MYZAPP0CAP1 466 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 IFNGR1P15260 489 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 PGCP20142 388 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 IDH3GP51553 393 aaPredicted RBP13.8□□□□□ -0.2
DDX55-202ENST00000354291 P2RX1P51575 399 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 PGS1Q32NB8 556 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 DCST2Q5T1A1 773 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 VHLLQ6RSH7 139 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 ZCCHC24Q8N2G6 241 aaKnown RBP13.8□□□□□ -0.2
DDX55-202ENST00000354291 OR52E4Q8NGH9 312 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 RFWD2Q8NHY2 731 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 JMJD8Q96S16 334 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 PARD6BQ9BYG5 372 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 ACTL7BQ9Y614 415 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 CMYA5Q8N3K9 4069 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 NBEAL2Q6ZNJ1 2754 aa13.8□□□□□ -0.2
DDX55-202ENST00000354291 WDR91A4D1P6 747 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 DUXAA6NLW8 204 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 GTPBP1O00178 669 aaKnown RBP13.79□□□□□ -0.2
DDX55-202ENST00000354291 ITM2AO43736 263 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 ITGA5P08648 1049 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 OR4A8P0C604 315 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 PRKCAP17252 672 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 LIMS1P48059 325 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 ATP12AP54707 1039 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 SUMO3P55854 103 aaPredicted RBP13.79□□□□□ -0.2
DDX55-202ENST00000354291 ABCE1P61221 599 aaKnown RBP13.79□□□□□ -0.2
DDX55-202ENST00000354291 HBA1P69905 142 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 SLC25A3Q00325 362 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 SELENBP1Q13228 472 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 CHI3L2Q15782 390 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 HIST2H2BDQ6DRA6 164 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 USP43Q70EL4 1123 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 GPR119Q8TDV5 335 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 PKNOX2Q96KN3 472 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 KCNS3Q9BQ31 491 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 SLC17A5Q9NRA2 495 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 CA10Q9NS85 328 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.79□□□□□ -0.2
DDX55-202ENST00000354291 PCDHGB4Q9UN71 923 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 USP22Q9UPT9 525 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 AMDHD2Q9Y303 409 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 RAP2CQ9Y3L5 183 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 PCDHB14Q9Y5E9 798 aa13.79□□□□□ -0.2
DDX55-202ENST00000354291 KCNE3Q9Y6H6 103 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms