RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 PNPT1Q8TCS8 783 aaKnown RBP15.69■□□□□ 0.1
HDDC3-201ENST00000330334 ZNF775Q96BV0 537 aaPredicted RBP15.69■□□□□ 0.1
HDDC3-201ENST00000330334 PERPQ96FX8 193 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 COX4I2Q96KJ9 171 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 OR52B2Q96RD2 323 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 OR11A1Q9GZK7 315 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 NOSIPQ9Y314 301 aaKnown RBP15.69■□□□□ 0.1
HDDC3-201ENST00000330334 TMED7Q9Y3B3 224 aa15.69■□□□□ 0.1
HDDC3-201ENST00000330334 FAM234BA2RU67 622 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 LYZL6O75951 148 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 ANP32DO95626 131 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 GGT1P19440 569 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 EDNRAP25101 427 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 TACR3P29371 465 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 CRISP3P54108 245 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 EPGNQ6UW88 154 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 MIER2Q8N344 545 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 ZNF433Q8N7K0 673 aaPredicted RBP15.68■□□□□ 0.1
HDDC3-201ENST00000330334 SLC38A5Q8WUX1 472 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 APH1AQ96BI3 265 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 MUCL1Q96DR8 90 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 Q96MF0 132 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 C7orf26Q96N11 449 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 USH1CQ9Y6N9 552 aa15.68■□□□□ 0.1
HDDC3-201ENST00000330334 A0A0G2JPF8 293 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 DPRXA6NFQ7 191 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 OR5H1A6NKK0 313 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 HNRNPCL2B2RXH8 293 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 HNRNPCL3B7ZW38 293 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 OVOL3O00110 214 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 HNRNPCL1O60812 293 aaKnown RBP15.67■□□□□ 0.1
HDDC3-201ENST00000330334 THBS1P07996 1170 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 HNRNPCL4P0DMR1 293 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 ETFAP13804 333 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 ACAA2P42765 397 aaKnown RBP15.67■□□□□ 0.1
HDDC3-201ENST00000330334 CRATP43155 626 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 OR2B6P58173 313 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 DSTNP60981 165 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 CAPRIN1Q14444 709 aaKnown RBP15.67■□□□□ 0.1
HDDC3-201ENST00000330334 PPA1Q15181 289 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 LIN52Q52LA3 116 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 C1QTNF12Q5T7M4 302 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 RNF220Q5VTB9 566 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 PRAMEF8Q5VWM4 474 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 PRAMEF7Q5VXH5 474 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 OR52P1PQ8NH57 321 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 GTF2H4Q92759 462 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 NAA11Q9BSU3 229 aaPredicted RBP15.67■□□□□ 0.1
HDDC3-201ENST00000330334 PARPBPQ9NWS1 579 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 MALT1Q9UDY8 824 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 ZNF232Q9UNY5 417 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 USF3Q68DE3 2245 aa15.67■□□□□ 0.1
HDDC3-201ENST00000330334 ZANQ9Y493 2812 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 TMEM72A0PK05 275 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 MRPL33O75394 65 aaKnown RBP15.66■□□□□ 0.1
HDDC3-201ENST00000330334 DANCRP0C864 163 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 IMPDH2P12268 514 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 NTF4P34130 210 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 BSPH1Q075Z2 132 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 LARS2Q15031 903 aaKnown RBP15.66■□□□□ 0.1
HDDC3-201ENST00000330334 ZNF672Q499Z4 452 aaPredicted RBP15.66■□□□□ 0.1
HDDC3-201ENST00000330334 ALKBH2Q6NS38 261 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 PAQR6Q6TCH4 344 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 CLEC9AQ6UXN8 241 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 CCDC103Q8IW40 242 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 SLC35B4Q969S0 331 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 FBXW5Q969U6 566 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 VPS33AQ96AX1 596 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 RADILQ96JH8 1075 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 SMR3AQ99954 134 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 TRIM2Q9C040 744 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 GRIP2Q9C0E4 1043 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 RAD21L1Q9H4I0 556 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 PIF1Q9H611 641 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 ARMC7Q9H6L4 198 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 BCL2L10Q9HD36 194 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 RLIMQ9NVW2 624 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 TMEM45AQ9NWC5 275 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 ASB6Q9NWX5 421 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 IFT52Q9Y366 437 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 CADP27708 2225 aa15.66■□□□□ 0.1
HDDC3-201ENST00000330334 TMEM247A6NEH6 219 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 H7C1Q1 480 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 CLOCKO15516 846 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 HEXAP06865 529 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 BMP2P12643 396 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 CCNA2P20248 432 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 RPS4XP62701 263 aaKnown RBP15.65■□□□□ 0.1
HDDC3-201ENST00000330334 IRX1P78414 480 aaPredicted RBP15.65■□□□□ 0.1
HDDC3-201ENST00000330334 LTBQ06643 244 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 FADDQ13158 208 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 SLC17A1Q14916 467 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 RGNQ15493 299 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 WBP2NLQ6ICG8 309 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 OR7E24Q6IFN5 339 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 ZNF836Q6ZNA1 936 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 VRK2Q86Y07 508 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 OR9I1Q8NGQ6 314 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 SMAP2Q8WU79 429 aaPredicted RBP15.65■□□□□ 0.1
HDDC3-201ENST00000330334 MUS81Q96NY9 551 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms