RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 OR2T5Q6IEZ7 315 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 LINC00114Q6XXX2 140 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 TRILQ7L0X0 811 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 ADGRG3Q86Y34 549 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 OR5M1Q8NGP8 315 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 OR2T29Q8NH02 315 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 SFXN2Q96NB2 322 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 PRSS27Q9BQR3 290 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 SLC6A15Q9H2J7 730 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 RHCGQ9UBD6 479 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 SLC7A7Q9UM01 511 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 FLNCQ14315 2725 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 TMED7-TICAM2A0A0A6YYA0 188 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 TRGV5A0A0B4J1U4 118 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 NPIPA5E9PKD4 350 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 EFNA2O43921 213 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 SUSD5O60279 629 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 TIPRLO75663 272 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 KRT36O76013 467 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 CST1P01037 141 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 SMIM11AP58511 58 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 SELENBP1Q13228 472 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 TRAM2Q15035 370 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 ST6GALNAC3Q8NDV1 305 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 NEIL3Q8TAT5 605 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 ZNF426Q9BUY5 554 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 SERINC1Q9NRX5 453 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 DNAJB9Q9UBS3 223 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 CHRNA9Q9UGM1 479 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 NPIPA1Q9UND3 350 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 TMED7Q9Y3B3 224 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 TESMINQ9Y4I5 508 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 LIPGQ9Y5X9 500 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 SVILO95425 2214 aa17.9■□□□□ 0.46
PDLIM2-221ENST00000622702 A0A1B0GVC2 190 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 ELOA3DA6NLF2 546 aaPredicted RBP17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 H0YHG0 523 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 ZNF208O43345 1280 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 DEAF1O75398 565 aaPredicted RBP17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 FUT4P22083 530 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 CXCR1P25024 350 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 FASP25445 335 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 FKBP2P26885 142 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 RRM2P31350 389 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 GCKP35557 465 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 HMGA2P52926 109 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 SPIBQ01892 262 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 ELOA3BQ3SY89 546 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 NHSL2Q5HYW2 709 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 C3orf33Q6P1S2 294 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 WDR88Q6ZMY6 472 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 ELOA3Q8NG57 546 aa17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 SLC25A43Q8WUT9 341 aaPredicted RBP17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 SPIN1Q9Y657 262 aaPredicted RBP17.89■□□□□ 0.45
PDLIM2-221ENST00000622702 CLOCKO15516 846 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 GADD45GO95257 159 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 ACTL6AO96019 429 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 IL11P20809 199 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 RBM34P42696 430 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 RAC1P63000 192 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 GK3PQ14409 553 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 ATP6AP1Q15904 470 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 KRTCAP3Q53RY4 240 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 POMZP3Q6PJE2 187 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 NKAIN4Q8IVV8 208 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 RNF217Q8TC41 542 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 GPR137Q96N19 417 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 FUZQ9BT04 418 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 TMEM43Q9BTV4 400 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 LDAHQ9H6V9 325 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 REEP1Q9H902 201 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 SLC6A5Q9Y345 797 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 RRP15Q9Y3B9 282 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 ZNF337Q9Y3M9 751 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 LYVE1Q9Y5Y7 322 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 AP4B1Q9Y6B7 739 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 LDLRP01130 860 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 LIMS1P48059 325 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 EIF2S3LQ2VIR3 472 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 VASNQ6EMK4 673 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 GFRALQ6UXV0 394 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 SLC7A13Q8TCU3 470 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 HS6ST2Q96MM7 605 aa17.88■□□□□ 0.45
PDLIM2-221ENST00000622702 IGKV1D-42A0A075B6H8 117 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 TMEM72A0PK05 275 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 AQP7O14520 342 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 NPIPB7O75200 414 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 BMP7P18075 431 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 CLK1P49759 484 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 BCL2A1Q16548 175 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 FGD3Q5JSP0 725 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 C5orf46Q6UWT4 87 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 LILRA2Q8N149 483 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 OR4C15Q8NGM1 316 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 PRR7Q8TB68 274 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 STK35Q8TDR2 534 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 ACOT11Q8WXI4 607 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 LRTOMTQ8WZ04 291 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 ABTB1Q969K4 478 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms