RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 IST1P53990 364 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 RASGEF1BQ0VAM2 473 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 ADGRG3Q86Y34 549 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 STON2Q8WXE9 905 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 ARL5BQ96KC2 179 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 PSD2Q9BQI7 771 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 TACO1Q9BSH4 297 aaKnown RBP20.12■□□□□ 0.81
CCDC9-204ENST00000599398 OR11A1Q9GZK7 315 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 A4GALTQ9NPC4 353 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 SLC52A3Q9NQ40 469 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.12■□□□□ 0.81
CCDC9-204ENST00000599398 PLEKHA6Q9Y2H5 1048 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 TMED7Q9Y3B3 224 aa20.12■□□□□ 0.81
CCDC9-204ENST00000599398 F8P00451 2351 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 CYTIPO60759 359 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 CD1EP15812 388 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 PPIBP23284 216 aaKnown RBP20.11■□□□□ 0.81
CCDC9-204ENST00000599398 FKBP2P26885 142 aaKnown RBP20.11■□□□□ 0.81
CCDC9-204ENST00000599398 TACR3P29371 465 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 SLC1A3P43003 542 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 ART1P52961 327 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 STAC2Q6ZMT1 411 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 MSRB3Q8IXL7 192 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 NINJ1Q92982 152 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 ZHX1-C8orf76Q96EF9 292 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 SIKE1Q9BRV8 207 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 ARMC7Q9H6L4 198 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 CCM2LQ9NUG4 571 aaPredicted RBP20.11■□□□□ 0.81
CCDC9-204ENST00000599398 ZNF446Q9NWS9 450 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 VAPAQ9P0L0 249 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 OSGIN1Q9UJX0 560 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 HDGFL3Q9Y3E1 203 aa20.11■□□□□ 0.81
CCDC9-204ENST00000599398 A0A1W2PP18 115 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 FAAHO00519 579 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 THBS1P07996 1170 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 BMP2P12643 396 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 DNASE1P24855 282 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 COPZ1P61923 177 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 ZNF311Q5JNZ3 666 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 GCNT6Q5T4J0 391 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 RNF220Q5VTB9 566 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 TFAP2EQ6VUC0 442 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 CADM2Q8N3J6 435 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 BBS10Q8TAM1 723 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 ZNF775Q96BV0 537 aaPredicted RBP20.1■□□□□ 0.81
CCDC9-204ENST00000599398 DDIT4LQ96D03 193 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 PIK3IP1Q96FE7 263 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 BCO1Q9HAY6 547 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 IFT52Q9Y366 437 aa20.1■□□□□ 0.81
CCDC9-204ENST00000599398 TEP1Q99973 2627 aaKnown RBP20.09■□□□□ 0.81
CCDC9-204ENST00000599398 TMEM72A0PK05 275 aa20.09■□□□□ 0.81
CCDC9-204ENST00000599398 EVPLLA8MZ36 301 aa20.09■□□□□ 0.81
CCDC9-204ENST00000599398 PMS2P2O95744 297 aa20.09■□□□□ 0.81
CCDC9-204ENST00000599398 CRYGSP22914 178 aa20.09■□□□□ 0.81
CCDC9-204ENST00000599398 CLK1P49759 484 aaKnown RBP20.09■□□□□ 0.81
CCDC9-204ENST00000599398 OR2B6P58173 313 aa20.09■□□□□ 0.81
CCDC9-204ENST00000599398 ZSWIM7Q19AV6 140 aa20.09■□□□□ 0.81
CCDC9-204ENST00000599398 PRAMEF8Q5VWM4 474 aa20.09■□□□□ 0.81
CCDC9-204ENST00000599398 PRAMEF7Q5VXH5 474 aa20.09■□□□□ 0.81
CCDC9-204ENST00000599398 MTDHQ86UE4 582 aaKnown RBP20.09■□□□□ 0.81
CCDC9-204ENST00000599398 LSRQ86X29 649 aaPredicted RBP20.09■□□□□ 0.81
CCDC9-204ENST00000599398 CLIP4Q8N3C7 705 aa20.09■□□□□ 0.81
CCDC9-204ENST00000599398 NFKBIDQ8NI38 313 aa20.09■□□□□ 0.81
CCDC9-204ENST00000599398 ZNF300Q96RE9 604 aaPredicted RBP20.09■□□□□ 0.81
CCDC9-204ENST00000599398 SPATA9Q9BWV2 254 aa20.09■□□□□ 0.81
CCDC9-204ENST00000599398 BCL2L10Q9HD36 194 aa20.09■□□□□ 0.81
CCDC9-204ENST00000599398 LEF1Q9UJU2 399 aaPredicted RBP20.09■□□□□ 0.81
CCDC9-204ENST00000599398 CORO2BQ9UQ03 480 aa20.09■□□□□ 0.81
CCDC9-204ENST00000599398 PGM3O95394 542 aa20.08■□□□□ 0.81
CCDC9-204ENST00000599398 PPP3CBP16298 524 aa20.08■□□□□ 0.81
CCDC9-204ENST00000599398 CXCR1P25024 350 aa20.08■□□□□ 0.81
CCDC9-204ENST00000599398 ACAA2P42765 397 aaKnown RBP20.08■□□□□ 0.81
CCDC9-204ENST00000599398 TESK1Q15569 626 aa20.08■□□□□ 0.81
CCDC9-204ENST00000599398 PAMR1Q6UXH9 720 aa20.08■□□□□ 0.81
CCDC9-204ENST00000599398 C22orf34Q6ZV56 151 aa20.08■□□□□ 0.81
CCDC9-204ENST00000599398 CXorf67Q86X51 503 aaPredicted RBP20.08■□□□□ 0.81
CCDC9-204ENST00000599398 ACTR6Q9GZN1 396 aa20.08■□□□□ 0.81
CCDC9-204ENST00000599398 PLEKHF2Q9H8W4 249 aa20.08■□□□□ 0.81
CCDC9-204ENST00000599398 TMEM181Q9P2C4 612 aa20.08■□□□□ 0.81
CCDC9-204ENST00000599398 ING1Q9UK53 422 aaPredicted RBP20.08■□□□□ 0.81
CCDC9-204ENST00000599398 PRR14LQ5THK1 2151 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 TRBV5-3A0A0A0MS03 114 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 A0A1W2PPR1 153 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 DEFB108AA8MXU0 73 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 ANGPT2O15123 496 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 SIAH2O43255 324 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 ZNF208O43345 1280 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 TROVE2P10155 538 aaKnown RBP eCLIP20.07■□□□□ 0.8
CCDC9-204ENST00000599398 ARAFP10398 606 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 PRG2P13727 222 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 KEAP1Q14145 624 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 HSP90B2PQ58FF3 399 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 WBP2NLQ6ICG8 309 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 C10orf111Q8N326 155 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 TMEM120AQ9BXJ8 343 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 ADAM19Q9H013 955 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 IKZF5Q9H5V7 419 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 ZNF385DQ9H6B1 395 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 EMC3Q9P0I2 261 aa20.07■□□□□ 0.8
CCDC9-204ENST00000599398 GPR52Q9Y2T5 361 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms