RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 KHKP50053 298 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 GFRA1P56159 465 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 LMO4P61968 165 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 SNRPD2P62316 118 aaKnown RBP4.25□□□□□ -1.73
ERCC1-216ENST00000592444 MYBPC1Q00872 1141 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 PRDX1Q06830 199 aaKnown RBP4.25□□□□□ -1.73
ERCC1-216ENST00000592444 RASGEF1BQ0VAM2 473 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 CSTF3Q12996 717 aaKnown RBP4.25□□□□□ -1.73
ERCC1-216ENST00000592444 PDE7AQ13946 482 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 KRT72Q14CN4 511 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 MLC1Q15049 377 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 PPA1Q15181 289 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 STK11Q15831 433 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 PRSS53Q2L4Q9 553 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 MPEG1Q2M385 716 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 C6orf136Q5SQH8 315 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 GKAP1Q5VSY0 366 aaPredicted RBP4.25□□□□□ -1.73
ERCC1-216ENST00000592444 METTL21CQ5VZV1 264 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 LIPJQ5W064 366 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 FRG2Q64ET8 278 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 ICE2Q659A1 982 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 MRM1Q6IN84 353 aaKnown RBP4.25□□□□□ -1.73
ERCC1-216ENST00000592444 TRPM8Q7Z2W7 1104 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 ADCK2Q7Z695 626 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 STK32CQ86UX6 486 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 CARM1Q86X55 608 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 MSRB3Q8IXL7 192 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 UBQLNLQ8IYU4 475 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 KIRREL3Q8IZU9 778 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 AFAP1L2Q8N4X5 818 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 TEX9Q8N6V9 391 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 CCNYL1Q8N7R7 359 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 CDYL2Q8N8U2 506 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 CCDC197Q8NCU1 140 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 OR5L2Q8NGL0 311 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 OR9I1Q8NGQ6 314 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 SLC5A11Q8WWX8 675 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 SMPDL3AQ92484 453 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 ERP27Q96DN0 273 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 THOC1Q96FV9 657 aaKnown RBP4.25□□□□□ -1.73
ERCC1-216ENST00000592444 SMIM10Q96HG1 83 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 METTL2AQ96IZ6 378 aaKnown RBP4.25□□□□□ -1.73
ERCC1-216ENST00000592444 FAR2Q96K12 515 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 RCHY1Q96PM5 261 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 FRG2BQ96QU4 278 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 PAIP2Q9BPZ3 127 aaKnown RBP4.25□□□□□ -1.73
ERCC1-216ENST00000592444 POTEKPQ9BYX7 375 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 SHCBP1LQ9BZQ2 653 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 PITHD1Q9GZP4 211 aaPredicted RBP4.25□□□□□ -1.73
ERCC1-216ENST00000592444 NSRP1Q9H0G5 558 aaKnown RBP4.25□□□□□ -1.73
ERCC1-216ENST00000592444 BRF2Q9HAW0 419 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 MID1IP1Q9NPA3 183 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 TCF7L2Q9NQB0 619 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 SERHLQ9NQF3 203 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 CCDC177Q9NQR7 707 aaPredicted RBP4.25□□□□□ -1.73
ERCC1-216ENST00000592444 ARL8BQ9NVJ2 186 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 TMEM45AQ9NWC5 275 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 OPTCQ9UBM4 332 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 VTI1BQ9UEU0 232 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 MCM8Q9UJA3 840 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 SRRM2Q9UQ35 2752 aaKnown RBP4.25□□□□□ -1.73
ERCC1-216ENST00000592444 MGAT4BQ9UQ53 548 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 STK38LQ9Y2H1 464 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 POLR3KQ9Y2Y1 108 aaPredicted RBP4.25□□□□□ -1.73
ERCC1-216ENST00000592444 ATP23Q9Y6H3 246 aa4.25□□□□□ -1.73
ERCC1-216ENST00000592444 A0A0A6YYD5 115 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 A0A0G2JND7 137 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 GOLGA8QA0A0J9YX86 632 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 MDFIC2A0A1B0GVS7 189 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 TRBC2A0A5B9 178 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 GOLGA8OA6NCC3 632 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 ANKRD33BA6NCL7 494 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 E9PBE3 544 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 GOLGA8NF8WBI6 632 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 PLPP1O14494 284 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 TRAF3IP2O43734 574 aaPredicted RBP4.24□□□□□ -1.73
ERCC1-216ENST00000592444 LCMT2O60294 686 aaKnown RBP4.24□□□□□ -1.73
ERCC1-216ENST00000592444 DNAJA2O60884 412 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 SNX4O95219 450 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 NTN1O95631 604 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 PDYNP01213 254 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 RBMY1A1P0DJD3 496 aaKnown RBP4.24□□□□□ -1.73
ERCC1-216ENST00000592444 C1GALT1C1LP0DN25 315 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 TROVE2P10155 538 aaKnown RBP eCLIP4.24□□□□□ -1.73
ERCC1-216ENST00000592444 NEFHP12036 1026 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 ANPEPP15144 967 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 SDC1P18827 310 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 GNAZP19086 355 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 CCND1P24385 295 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 PRDX6P30041 224 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 BSGP35613 385 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 HSD17B2P37059 387 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 HNF4AP41235 474 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 PIK3CBP42338 1070 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 MTNR1AP48039 350 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 HNRNPFP52597 415 aaKnown RBP4.24□□□□□ -1.73
ERCC1-216ENST00000592444 TPD52P55327 224 aaPredicted RBP4.24□□□□□ -1.73
ERCC1-216ENST00000592444 CTBP2P56545 445 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 ERVK-8P63133 956 aa4.24□□□□□ -1.73
ERCC1-216ENST00000592444 HMGCS1Q01581 520 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms