RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 SNNO75324 88 aaPredicted RBP6.74□□□□□ -1.33
NPC1-208ENST00000590301 ERLIN1O75477 346 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 CPSF4O95639 269 aaKnown RBP6.74□□□□□ -1.33
NPC1-208ENST00000590301 PMS2P2O95744 297 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 ADAP00813 363 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 IL6P05231 212 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 CD3EP07766 207 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 TFPIP10646 304 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 HOXB4P17483 251 aaPredicted RBP6.74□□□□□ -1.33
NPC1-208ENST00000590301 COX5AP20674 150 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 PTH2RP49190 550 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 RNF144AP50876 292 aaPredicted RBP6.74□□□□□ -1.33
NPC1-208ENST00000590301 SLC16A1P53985 500 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 RPS4XP62701 263 aaKnown RBP6.74□□□□□ -1.33
NPC1-208ENST00000590301 PHC1P78364 1004 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 KCNJ10P78508 379 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 MAPK14Q16539 360 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 GSTA3Q16772 222 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 GPAT3Q53EU6 434 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 TIMM23BQ5SRD1 257 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 NCMAPQ5T1S8 102 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 CLEC9AQ6UXN8 241 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 LRRC74BQ6ZQY2 392 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 MSANTD1Q6ZTZ1 278 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 BHLHA15Q7RTS1 189 aaPredicted RBP6.74□□□□□ -1.33
NPC1-208ENST00000590301 ZNF100Q8IYN0 542 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 CLEC4FQ8N1N0 589 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 ZNF563Q8TA94 476 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 PIGXQ8TBF5 258 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 PIWIL2Q8TC59 973 aaKnown RBP6.74□□□□□ -1.33
NPC1-208ENST00000590301 RAB8BQ92930 207 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 GTPBP3Q969Y2 492 aaKnown RBP6.74□□□□□ -1.33
NPC1-208ENST00000590301 MUCL1Q96DR8 90 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 PERPQ96FX8 193 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 RADILQ96JH8 1075 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 OR52E6Q96RD3 313 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 PAIP2Q9BPZ3 127 aaKnown RBP6.74□□□□□ -1.33
NPC1-208ENST00000590301 QRSL1Q9H0R6 528 aaKnown RBP6.74□□□□□ -1.33
NPC1-208ENST00000590301 PNPOQ9NVS9 261 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 NKIRAS1Q9NYS0 192 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 CALML5Q9NZT1 146 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 ING1Q9UK53 422 aaPredicted RBP6.74□□□□□ -1.33
NPC1-208ENST00000590301 TRAPPC4Q9Y296 219 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 GPR45Q9Y5Y3 372 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 EXPH5Q8NEV8 1989 aa6.74□□□□□ -1.33
NPC1-208ENST00000590301 NINQ8N4C6 2090 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 AKAP6Q13023 2319 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 IGHV3-15A0A0B4J1V0 119 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 CENPVL1A0A0U1RR11 272 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 CFAP73A6NFT4 308 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 ZNF814B7Z6K7 855 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 RFXANKO14593 260 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 KLF11O14901 512 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 ZNF208O43345 1280 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 SLC22A3O75751 556 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 DBIP07108 87 aaKnown RBP6.73□□□□□ -1.33
NPC1-208ENST00000590301 ALDOCP09972 364 aaKnown RBP6.73□□□□□ -1.33
NPC1-208ENST00000590301 ZCCHC18P0CG32 403 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 GGT1P19440 569 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 EPHA3P29320 983 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 SLC1A3P43003 542 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 POLR2HP52434 150 aaKnown RBP6.73□□□□□ -1.33
NPC1-208ENST00000590301 UFM1P61960 85 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 SLC35A1P78382 337 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 CHRNEQ04844 493 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 LTBQ06643 244 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 FUT5Q11128 374 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 CAPRIN1Q14444 709 aaKnown RBP6.73□□□□□ -1.33
NPC1-208ENST00000590301 TAB1Q15750 504 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 PDCD4Q53EL6 469 aaKnown RBP6.73□□□□□ -1.33
NPC1-208ENST00000590301 BEND6Q5SZJ8 279 aaPredicted RBP6.73□□□□□ -1.33
NPC1-208ENST00000590301 FBXW9Q5XUX1 488 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 ZNF621Q6ZSS3 439 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 JAZF1Q86VZ6 243 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 RNF130Q86XS8 419 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 PEX5LQ8IYB4 626 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 ANKRD42Q8N9B4 389 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 WDR60Q8WVS4 1066 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 AKAP1Q92667 903 aaKnown RBP eCLIP6.73□□□□□ -1.33
NPC1-208ENST00000590301 ZNF75CPQ92670 426 aaPredicted RBP6.73□□□□□ -1.33
NPC1-208ENST00000590301 FBXW5Q969U6 566 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 APH1AQ96BI3 265 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 ZNF524Q96C55 264 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 DDIT4LQ96D03 193 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 TRMT61AQ96FX7 289 aaKnown RBP6.73□□□□□ -1.33
NPC1-208ENST00000590301 MAELQ96JY0 434 aaKnown RBP6.73□□□□□ -1.33
NPC1-208ENST00000590301 TEX37Q96LM6 180 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 Q96MF0 132 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 NAA11Q9BSU3 229 aaPredicted RBP6.73□□□□□ -1.33
NPC1-208ENST00000590301 GRIP2Q9C0E4 1043 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 SLC38A1Q9H2H9 487 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 GSX1Q9H4S2 264 aaPredicted RBP6.73□□□□□ -1.33
NPC1-208ENST00000590301 ARMC7Q9H6L4 198 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 RMND5AQ9H871 391 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 CACYBPQ9HB71 228 aaKnown RBP6.73□□□□□ -1.33
NPC1-208ENST00000590301 CTPS2Q9NRF8 586 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 SDR39U1Q9NRG7 319 aaPredicted RBP6.73□□□□□ -1.33
NPC1-208ENST00000590301 FAIMQ9NVQ4 179 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 PARPBPQ9NWS1 579 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 ZIM2Q9NZV7 527 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms