RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ZBTB8AQ96BR9 441 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 TAMM41Q96BW9 452 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 LURAP1Q96LR2 239 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 SPATA5L1Q9BVQ7 753 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 SFXN3Q9BWM7 321 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 PINK1Q9BXM7 581 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 MTHFD2LQ9H903 347 aaPredicted RBP13.03□□□□□ -0.32
COMMD4-225ENST00000569245 MCCC2Q9HCC0 563 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 KCNN3Q9UGI6 736 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 WDR45Q9Y484 360 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 DTNAQ9Y4J8 743 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 MED12Q93074 2177 aa13.03□□□□□ -0.32
COMMD4-225ENST00000569245 EIF1AYO14602 144 aaKnown RBP13.02□□□□□ -0.33
COMMD4-225ENST00000569245 FKBP6O75344 327 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 MFN2O95140 757 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 OPN1LWP04000 364 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 HOXB6P17509 224 aaKnown RBP13.02□□□□□ -0.33
COMMD4-225ENST00000569245 PEX19P40855 299 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 EIF1AXP47813 144 aaKnown RBP13.02□□□□□ -0.33
COMMD4-225ENST00000569245 CLDN15P56746 228 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 SELENOWP63302 87 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 EEF1A1P68104 462 aaKnown RBP13.02□□□□□ -0.33
COMMD4-225ENST00000569245 ZNF117Q03924 483 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 TMEM44Q2T9K0 475 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 PLPPR5Q32ZL2 321 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 CYBRD1Q53TN4 286 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 EEF1A1P5Q5VTE0 462 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 OR2A2Q6IF42 318 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 ZFP1Q6P2D0 407 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 LUZP2Q86TE4 346 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 ADGRG5Q8IZF4 528 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 ZNF619Q8N2I2 560 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 GTPBP8Q8N3Z3 284 aaPredicted RBP13.02□□□□□ -0.33
COMMD4-225ENST00000569245 TMCO5AQ8N6Q1 288 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 CNEP1R1Q8N9A8 125 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 SLC26A7Q8TE54 656 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 RASSF5Q8WWW0 418 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 OIT3Q8WWZ8 545 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 RSRC1Q96IZ7 334 aaKnown RBP13.02□□□□□ -0.33
COMMD4-225ENST00000569245 PRRG4Q9BZD6 226 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 CCM2LQ9NUG4 571 aaPredicted RBP13.02□□□□□ -0.33
COMMD4-225ENST00000569245 ADPRHL2Q9NX46 363 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 FOXD3Q9UJU5 478 aaPredicted RBP13.02□□□□□ -0.33
COMMD4-225ENST00000569245 MKLN1Q9UL63 735 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 CREBBPQ92793 2442 aa13.02□□□□□ -0.33
COMMD4-225ENST00000569245 DHRS12A0PJE2 317 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 TMEM229AB2RXF0 380 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 KIAA0513O60268 411 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 CYP7B1O75881 506 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 RPS4Y1P22090 263 aaKnown RBP13.01□□□□□ -0.33
COMMD4-225ENST00000569245 PSMA4P25789 261 aaKnown RBP13.01□□□□□ -0.33
COMMD4-225ENST00000569245 SLC7A1P30825 629 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 EIF1P41567 113 aaKnown RBP13.01□□□□□ -0.33
COMMD4-225ENST00000569245 CCR4P51679 360 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 KRTAP10-9P60411 292 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 PON3Q15166 354 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 NDUFAF6Q330K2 333 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 PDZK1Q5T2W1 519 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 CBLN3Q6UW01 205 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 OLIG3Q7RTU3 272 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 TMEM200AQ86VY9 491 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 KIF18BQ86Y91 864 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 ARMC8Q8IUR7 673 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 FNDC9Q8TBE3 224 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 CANT1Q8WVQ1 401 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 LZICQ8WZA0 190 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 STMN2Q93045 179 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 PYURFQ96I23 114 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 ZNF845Q96IR2 970 aaPredicted RBP13.01□□□□□ -0.33
COMMD4-225ENST00000569245 RBM24Q9BX46 236 aaKnown RBP13.01□□□□□ -0.33
COMMD4-225ENST00000569245 PIGMQ9H3S5 423 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 MAGIXQ9H6Y5 334 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 TMEM185BQ9H7F4 350 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 S100A14Q9HCY8 104 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 IFT52Q9Y366 437 aa13.01□□□□□ -0.33
COMMD4-225ENST00000569245 MYO9AB2RTY4 2548 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 A0A1W2PNV4 684 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 C7orf72A4D263 438 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 SERINC4A6NH21 518 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 AGAP5A6NIR3 686 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 NPIPB9F8W1W9 429 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 ZNF264O43296 627 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 OIP5O43482 229 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 SMNDC1O75940 238 aaKnown RBP eCLIP13□□□□□ -0.33
COMMD4-225ENST00000569245 PRKD3O94806 890 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 ZNF682O95780 498 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 PABPC4LP0CB38 370 aaKnown RBP13□□□□□ -0.33
COMMD4-225ENST00000569245 UBL4AP11441 157 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 CD247P20963 164 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 KCNJ5P48544 419 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 ERFP50548 548 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 P2RX1P51575 399 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 SUMO3P55854 103 aaPredicted RBP13□□□□□ -0.33
COMMD4-225ENST00000569245 RAC1P63000 192 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 FBXL19-AS1Q494R0 122 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 FAM98BQ52LJ0 330 aaKnown RBP13□□□□□ -0.33
COMMD4-225ENST00000569245 PEX5LQ8IYB4 626 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 LILRA2Q8N149 483 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 PAPD5Q8NDF8 572 aaKnown RBP13□□□□□ -0.33
COMMD4-225ENST00000569245 TOR1AIP2Q8NFQ8 470 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms