RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 UNC93AQ86WB7 457 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 DEFB106AQ8N104 65 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 OR6F1Q8NGZ6 308 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 CCL4L1Q8NHW4 92 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 MR1Q95460 341 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 RPRD1AQ96P16 312 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-219ENST00000556413 GBP5Q96PP8 586 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 SMIM14Q96QK8 99 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 ERGIC2Q96RQ1 377 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 RASL10BQ96S79 203 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 CTRCQ99895 268 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 ABCG4Q9H172 646 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 ZDHHC6Q9H6R6 413 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 SGK2Q9HBY8 427 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 MRPL40Q9NQ50 206 aaKnown RBP2.27□□□□□ -2.05
SCFD1-219ENST00000556413 DMAC2Q9NW81 257 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 TMEM9Q9P0T7 183 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 MRPS18BQ9Y676 258 aaKnown RBP2.27□□□□□ -2.05
SCFD1-219ENST00000556413 HECTD1Q9ULT8 2610 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 BOD1L1Q8NFC6 3051 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 PTPRBP23467 1997 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 MYH11P35749 1972 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 DENND4CQ5VZ89 1909 aa2.27□□□□□ -2.05
SCFD1-219ENST00000556413 ARID1AO14497 2285 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 URB1O60287 2271 aaKnown RBP2.26□□□□□ -2.05
SCFD1-219ENST00000556413 FLNBO75369 2602 aaKnown RBP2.26□□□□□ -2.05
SCFD1-219ENST00000556413 C2orf92A0A1B0GVN3 265 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 F5H5T6 163 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 GOLGA8SH3BPF8 625 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 SLC33A1O00400 549 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-219ENST00000556413 CALUO43852 315 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-219ENST00000556413 LETM1O95202 739 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-219ENST00000556413 IGLV3-27P01718 113 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 APOEP02649 317 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 UGT2B4P06133 528 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 RHOCP08134 193 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 EPB41P11171 864 aaKnown RBP2.26□□□□□ -2.05
SCFD1-219ENST00000556413 CCL4P13236 92 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 ACP1P24666 158 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 AKT2P31751 481 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 UGT1A5P35504 534 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 FHITP49789 147 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 SULT1E1P49888 294 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 SLC25A1P53007 311 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 CCL7P80098 99 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 CXCL6P80162 114 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 NUCB2P80303 420 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 LCP2Q13094 533 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 ELAVL3Q14576 367 aaKnown RBP2.26□□□□□ -2.05
SCFD1-219ENST00000556413 IRF4Q15306 451 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 CCDC40Q4G0X9 1142 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 ZCWPW2Q504Y3 356 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 TAF3Q5VWG9 929 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 LYPLAL1Q5VWZ2 237 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 C22orf39Q6P5X5 142 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 TMEM135Q86UB9 458 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 HORMAD1Q86X24 394 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 AQP12AQ8IXF9 295 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 C12orf56Q8IXR9 622 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 ZNF491Q8N8L2 437 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 NHLRC2Q8NBF2 726 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 FBXL13Q8NEE6 735 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 OR2A12Q8NGT7 310 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 OR4C6Q8NH72 309 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 PDCD6IPQ8WUM4 868 aaKnown RBP2.26□□□□□ -2.05
SCFD1-219ENST00000556413 RNF138Q8WVD3 245 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 SNRNP27Q8WVK2 155 aaKnown RBP2.26□□□□□ -2.05
SCFD1-219ENST00000556413 PATE1Q8WXA2 126 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 OR8D1Q8WZ84 308 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 NTNG2Q96CW9 530 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 MED8Q96G25 268 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 PDXPQ96GD0 296 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 ELMO2Q96JJ3 720 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 BMFQ96LC9 184 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 MAGEB18Q96M61 343 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 ZNF396Q96N95 335 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-219ENST00000556413 CPXM1Q96SM3 734 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 RUFY1Q96T51 708 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 ZNF559Q9BR84 538 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 CRACR2AQ9BSW2 395 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 EDEM3Q9BZQ6 932 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 RDH14Q9HBH5 336 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 S100A14Q9HCY8 104 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 GPR173Q9NS66 373 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 PIGVQ9NUD9 493 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 MED17Q9NVC6 651 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 GPATCH2LQ9NWQ4 482 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 COMMD8Q9NX08 183 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 DDIT4Q9NX09 232 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 RAB20Q9NX57 234 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 SLCO1C1Q9NYB5 712 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 ANKMY1Q9P2S6 941 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 DNAJB9Q9UBS3 223 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 APOBEC3BQ9UH17 382 aaKnown RBP2.26□□□□□ -2.05
SCFD1-219ENST00000556413 SUN2Q9UH99 717 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 MOSPD1Q9UJG1 213 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 OR1A2Q9Y585 309 aa2.26□□□□□ -2.05
SCFD1-219ENST00000556413 ACACAQ13085 2346 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 GOLGA4Q13439 2230 aaKnown RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 PLXND1Q9Y4D7 1925 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms