RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 DSC1Q08554 894 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 PLCXD3Q63HM9 321 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 SLC22A25Q6T423 547 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 CMIPQ8IY22 773 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 OR5AR1Q8NGP9 310 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 OR10K1Q8NGX5 313 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 RTP4Q96DX8 246 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 FCRL1Q96LA6 429 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 HCAR1Q9BXC0 346 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 RASD1Q9Y272 281 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 PRELID3BQ9Y3B1 194 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 ZCWPW2A0A1B0GU75 182 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 ANTXRLA6NF34 631 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 CEBPZOSA8MTT3 80 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 LIPCP11150 499 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 CSNK1A1P48729 337 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 TAS2R30P59541 319 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 BEX5Q5H9J7 111 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF546Q86UE3 836 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 LACC1Q8IV20 430 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 CNTNAP3Q9BZ76 1288 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 OPA3Q9H6K4 179 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 FN3KRPQ9HA64 309 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 LAMTOR5O43504 91 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 DPM1O60762 260 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 DBHP09172 617 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 HTR3AP46098 478 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 CXCR4P61073 352 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 UBE2KP61086 200 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 WDR5P61964 334 aaKnown RBP9.32□□□□□ -0.92
COL4A6-208ENST00000538570 SQSTM1Q13501 440 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 MEPCEQ7L2J0 689 aaKnown RBP9.32□□□□□ -0.92
COL4A6-208ENST00000538570 CD163Q86VB7 1156 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 TPRA1Q86W33 373 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 PRR22Q8IZ63 422 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 CELF2-AS1Q8N7Q2 184 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 TMEM163Q8TC26 289 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 GIMAP1Q8WWP7 306 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 SORCS2Q96PQ0 1159 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 GORASP2Q9H8Y8 452 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 HIF1ANQ9NWT6 349 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 PEAK1Q9H792 1746 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 A0A087WUU8 490 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 POM121BA6NF01 834 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 SULT2B1O00204 365 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF217O75362 1048 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 F10P00742 488 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 GPX3P22352 226 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 ACY1Q03154 408 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 TRIM61Q5EBN2 209 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 TMEM201Q5SNT2 666 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF691Q5VV52 312 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 TMPRSS7Q7RTY8 843 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 S100A7AQ86SG5 101 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 OR4M1Q8NGD0 313 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 OR6F1Q8NGZ6 308 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 CDS1Q92903 461 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 UPRTQ96BW1 309 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 BPIFA2Q96DR5 249 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 LMF2Q9BU23 707 aaKnown RBP9.32□□□□□ -0.92
COL4A6-208ENST00000538570 BTBD2Q9BX70 525 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 METTL17Q9H7H0 456 aaPredicted RBP9.32□□□□□ -0.92
COL4A6-208ENST00000538570 EVA1AQ9H8M9 152 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 PATZ1Q9HBE1 687 aaKnown RBP9.32□□□□□ -0.92
COL4A6-208ENST00000538570 AGPAT4Q9NRZ5 378 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF337Q9Y3M9 751 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 ENTPD2Q9Y5L3 495 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 MEIS3P2A8K0S8 358 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 STK17BO94768 372 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 KCNK2O95069 426 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 CPOXP36551 454 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 EMX1Q04741 257 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 EXOSC6Q5RKV6 272 aaKnown RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 ADIPOR2Q86V24 386 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 ENTHD1Q8IYW4 607 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 C12orf76Q8N812 135 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 FOXJ1Q92949 421 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 UTP4Q969X6 686 aaKnown RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 C16orf70Q9BSU1 422 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 HHLA2Q9UM44 414 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 A0A0J9YY10 115 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 EPHA4P54764 986 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SIX1Q15475 284 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF761Q86XN6 746 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 PXT1Q8NFP0 134 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 EGLN3Q9H6Z9 239 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 ACKR4Q9NPB9 350 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 VDAC3Q9Y277 283 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 BTBD17A6NE02 478 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 FABP7O15540 132 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SDC1P18827 310 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 HLA-DMAP28067 261 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 CD68P34810 354 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 CLDN6P56747 220 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 LTBQ06643 244 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 HMGN3Q15651 99 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 PLPP5Q8NEB5 264 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 IL1F10Q8WWZ1 152 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 MIB2Q96AX9 1013 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 CPNE7Q9UBL6 633 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms