RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 GPATCH2Q9NW75 528 aa17.7■□□□□ 0.42
SQSTM1-215ENST00000514093 DCTN4Q9UJW0 460 aa17.7■□□□□ 0.42
SQSTM1-215ENST00000514093 EMCNQ9ULC0 261 aa17.7■□□□□ 0.42
SQSTM1-215ENST00000514093 FIS1Q9Y3D6 152 aa17.7■□□□□ 0.42
SQSTM1-215ENST00000514093 MGAM2Q2M2H8 2515 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 DNAJA2O60884 412 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 MYL2P10916 166 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 CCNA2P20248 432 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 MAGEA8P43361 318 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 SLC16A1P53985 500 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 OR2B6P58173 313 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 ACTG1P63261 375 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 TRIP10Q15642 601 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 SPDYE7PQ495Y7 208 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 LCA5Q86VQ0 697 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 ZCCHC24Q8N2G6 241 aaKnown RBP17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 SEMA6DQ8NFY4 1073 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 TMEM234Q8WY98 164 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 OR7D2Q96RA2 312 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 SDF2Q99470 211 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 METTL17Q9H7H0 456 aaPredicted RBP17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 ACER3Q9NUN7 267 aa17.69■□□□□ 0.42
SQSTM1-215ENST00000514093 IGHV1-18A0A0C4DH31 117 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 B9A039 149 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 FCMRO60667 390 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 PMS2P2O95744 297 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 WNT11O96014 354 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 CSTAP01040 98 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 TACSTD2P09758 323 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 OR4A8P0C604 315 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 LINC00032P0C843 101 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 LAMP1P11279 417 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 DAOP14920 347 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 PGCP20142 388 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 CASQ1P31415 396 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 CDH15P55291 814 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 GALNTL6Q49A17 601 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 CFAP157Q5JU67 520 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 ZYG11AQ6WRX3 759 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 C1orf162Q8NEQ5 155 aaPredicted RBP17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 OR5AK3PQ8NH89 298 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 SGMS2Q8NHU3 365 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 SLC25A43Q8WUT9 341 aaPredicted RBP17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 IFT81Q8WYA0 676 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 CCDC106Q9BWC9 280 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 CHRNA9Q9UGM1 479 aa17.68■□□□□ 0.42
SQSTM1-215ENST00000514093 BCAS1O75363 584 aaPredicted RBP17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 SKAP2O75563 359 aaPredicted RBP17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 BCKDHAP12694 445 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 GIFP27352 417 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 RYKP34925 604 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 IDH3GP51553 393 aaPredicted RBP17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 RPS26P62854 115 aaKnown RBP17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 TGFBR3Q03167 851 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 CCNIQ14094 377 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 ADIPOQQ15848 244 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 LIPMQ5VYY2 423 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 KLHL24Q6TFL4 600 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 OR56A1Q8NGH5 318 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 ZNF563Q8TA94 476 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 MTERF3Q96E29 417 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 ZMYND19Q96E35 227 aaPredicted RBP17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 CCDC126Q96EE4 140 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 RAB1BQ9H0U4 201 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 TUBB1Q9H4B7 451 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 MKLN1Q9UL63 735 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 FLVCR1Q9Y5Y0 555 aa17.67■□□□□ 0.42
SQSTM1-215ENST00000514093 SNUPNO95149 360 aaKnown RBP17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 C6orf47O95873 294 aa17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 MPGP29372 298 aa17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 APOBEC1P41238 236 aaKnown RBP17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 R3HCC1LQ7Z5L2 792 aaKnown RBP17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 OR5P2Q8WZ92 322 aa17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 HPS1Q92902 700 aa17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 GCDHQ92947 438 aaPredicted RBP17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 FMO2Q99518 471 aa17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 KCNS3Q9BQ31 491 aa17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 NMUR2Q9GZQ4 415 aa17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 PLK3Q9H4B4 646 aa17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 PARPBPQ9NWS1 579 aa17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 GIMAP2Q9UG22 337 aa17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 ATP6V1HQ9UI12 483 aa17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 HDGFL3Q9Y3E1 203 aa17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 SPIN1Q9Y657 262 aaPredicted RBP17.66■□□□□ 0.42
SQSTM1-215ENST00000514093 LYNX1G3V0Z9 82 aa17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 H3BQF6 201 aa17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 LSM1O15116 133 aaKnown RBP17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 SCAMP2O15127 329 aaKnown RBP17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 UGT2B17O75795 530 aa17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 KRT16P08779 473 aa17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 LYNX1P0DP58 116 aa17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 ASMTP46597 345 aa17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 COMPP49747 757 aaPredicted RBP17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 PPOXP50336 477 aa17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 ZNF141Q15928 474 aa17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 MAPK14Q16539 360 aa17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 ZNF572Q7Z3I7 529 aaPredicted RBP17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 ADGRG3Q86Y34 549 aa17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 ZFAND2BQ8WV99 257 aa17.65■□□□□ 0.42
SQSTM1-215ENST00000514093 SLC38A2Q96QD8 506 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms