RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 ALG2Q9H553 416 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 KLHL9Q9P2J3 617 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 LAMP3Q9UQV4 416 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 CHST2Q9Y4C5 530 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 RNF115Q9Y4L5 304 aa9.66□□□□□ -0.86
RNF4-212ENST00000509258 ARFGEF3Q5TH69 2177 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 CHD3Q12873 2000 aaKnown RBP9.65□□□□□ -0.86
RNF4-212ENST00000509258 ABCA1O95477 2261 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 ZC3H12DA2A288 527 aaKnown RBP9.65□□□□□ -0.86
RNF4-212ENST00000509258 DUXAA6NLW8 204 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 HDAC3O15379 428 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 CYTIPO60759 359 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 AK1P00568 194 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 ADAP00813 363 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 TP53P04637 393 aaPredicted RBP9.65□□□□□ -0.86
RNF4-212ENST00000509258 IDUAP35475 653 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 CHI3L1P36222 383 aaPredicted RBP9.65□□□□□ -0.86
RNF4-212ENST00000509258 DIO1P49895 249 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 CLNS1AP54105 237 aaKnown RBP9.65□□□□□ -0.86
RNF4-212ENST00000509258 FOXG1P55316 489 aaPredicted RBP9.65□□□□□ -0.86
RNF4-212ENST00000509258 RAC3P60763 192 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 TNK1Q13470 666 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 CAPRIN1Q14444 709 aaKnown RBP9.65□□□□□ -0.86
RNF4-212ENST00000509258 P2RY6Q15077 328 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 TAB1Q15750 504 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 CLEC12BQ2HXU8 276 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 GPAT3Q53EU6 434 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 ALKBH2Q6NS38 261 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 ADAM5Q6NVV9 412 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 EIF3MQ7L2H7 374 aaKnown RBP9.65□□□□□ -0.86
RNF4-212ENST00000509258 SPATA19Q7Z5L4 167 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 ADGRG3Q86Y34 549 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 LRRC34Q8IZ02 419 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 ST8SIA1Q92185 356 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 HSD17B8Q92506 261 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 KISS1RQ969F8 398 aaPredicted RBP9.65□□□□□ -0.86
RNF4-212ENST00000509258 VPS33AQ96AX1 596 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 AURKBQ96GD4 344 aaPredicted RBP9.65□□□□□ -0.86
RNF4-212ENST00000509258 OR52E6Q96RD3 313 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 BCO1Q9HAY6 547 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 SERINC1Q9NRX5 453 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 EXD2Q9NVH0 621 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 FAIMQ9NVQ4 179 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 THAP1Q9NVV9 213 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 PCDHGB4Q9UN71 923 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 MXRA5Q9NR99 2828 aa9.65□□□□□ -0.86
RNF4-212ENST00000509258 A0A1W2PP18 115 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 ZNF716A6NP11 495 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 CLOCKO15516 846 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 LYZL6O75951 148 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 SNUPNO95149 360 aaKnown RBP9.64□□□□□ -0.87
RNF4-212ENST00000509258 IGHV3-9P01782 118 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 YES1P07947 543 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 GUSBP08236 651 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 ETFAP13804 333 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 HOXB9P17482 250 aaPredicted RBP9.64□□□□□ -0.87
RNF4-212ENST00000509258 CCNA2P20248 432 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 OR3A2P47893 321 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 KCNJ10P78508 379 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 KRTAP1-1Q07627 177 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 RASGEF1BQ0VAM2 473 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 ITGADQ13349 1161 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 DPY19L1Q2PZI1 675 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 SYT14P1Q58G82 188 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 RPS26P11Q5JNZ5 115 aaPredicted RBP9.64□□□□□ -0.87
RNF4-212ENST00000509258 SFRP5Q5T4F7 317 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 ABLIM2Q6H8Q1 611 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 C3orf33Q6P1S2 294 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 ZNF621Q6ZSS3 439 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 TMPPEQ6ZT21 453 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 VRK2Q86Y07 508 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 CCDC103Q8IW40 242 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 C10orf111Q8N326 155 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 TMEM234Q8WY98 164 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 MUCL1Q96DR8 90 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 PANX1Q96RD7 426 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 MANSC1Q9H8J5 431 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 BARX1Q9HBU1 254 aaPredicted RBP9.64□□□□□ -0.87
RNF4-212ENST00000509258 RLIMQ9NVW2 624 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 NPAP1Q9NZP6 1156 aa9.64□□□□□ -0.87
RNF4-212ENST00000509258 SPIN1Q9Y657 262 aaPredicted RBP9.64□□□□□ -0.87
RNF4-212ENST00000509258 FBN1P35555 2871 aaKnown RBP9.64□□□□□ -0.87
RNF4-212ENST00000509258 TMEM72A0PK05 275 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 AGAP5A6NIR3 686 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 RNF223E7ERA6 249 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 OVOL3O00110 214 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 NUDT7P0C024 238 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 GKN3PP0CG01 181 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 IMPDH2P12268 514 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 PRG2P13727 222 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 PGCP20142 388 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 IGHV1-2P23083 117 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 IDH2P48735 452 aaKnown RBP9.63□□□□□ -0.87
RNF4-212ENST00000509258 SLC18A1P54219 525 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 PDCD4Q53EL6 469 aaKnown RBP9.63□□□□□ -0.87
RNF4-212ENST00000509258 TTMPQ5BVD1 217 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 NCMAPQ5T1S8 102 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 MRPL2Q5T653 305 aaKnown RBP9.63□□□□□ -0.87
RNF4-212ENST00000509258 ATAD3BQ5T9A4 648 aa9.63□□□□□ -0.87
RNF4-212ENST00000509258 NXNQ6DKJ4 435 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms