RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 RASL10BQ96S79 203 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 MTERF1Q99551 399 aaKnown RBP3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 ZNF717Q9BY31 904 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 OR8D2Q9GZM6 311 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 OR51B5Q9H339 312 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 RPF2Q9H7B2 306 aaKnown RBP3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 ACTR8Q9H981 624 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 COPS7BQ9H9Q2 264 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 LIN28AQ9H9Z2 209 aaKnown RBP3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 BRF2Q9HAW0 419 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 DEPPQ9NTK1 212 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 MS4A12Q9NXJ0 267 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 SH3BGRL2Q9UJC5 107 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 TINAGQ9UJW2 476 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 ERVK-11Q9UQG0 969 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 ENTPD4Q9Y227 616 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 KLF13Q9Y2Y9 288 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 YARS2Q9Y2Z4 477 aaKnown RBP3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 ATG4BQ9Y4P1 393 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 CCL27Q9Y4X3 112 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 ASB4Q9Y574 426 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 ANGPTL3Q9Y5C1 460 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 KLF2Q9Y5W3 355 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 CLCA3PQ9Y6N3 262 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 SPACA6W5XKT8 324 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 SPTAN1Q13813 2472 aaKnown RBP3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 CRYBG3Q68DQ2 2970 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 HIVEP3Q5T1R4 2406 aa3.18□□□□□ -1.9
UBE2D3-226ENST00000508635 PCNX3Q9H6A9 2034 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SPTBN1Q01082 2364 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 A0A0A6YYD5 115 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 A0A0G2JMM0 328 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 A0A1B0GTH9 108 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 A0A1W2PPB8 328 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 A0A1W2PRS3 328 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 PINLYPA6NC86 204 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SMIM23A6NLE4 172 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 WASHC1A8K0Z3 465 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 HSPB2A8KAH6 182 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 KIR3DP1A8MWS1 328 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 C19orf84I3L1E1 186 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 MANBAO00462 879 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 TM9SF1O15321 606 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 BIRC5O15392 142 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 HS6ST1O60243 411 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SPAG7O75391 227 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 ERLIN1O75477 346 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 PRKRAO75569 313 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 RGS11O94810 467 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SUPT7LO94864 414 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 GLSO94925 669 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 ZWINTO95229 277 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 NADKO95544 446 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 GPR75O95800 540 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 PDYNP01213 254 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 CLPSP04118 112 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 IGKV3-11P04433 115 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 FAM58BPP0C7Q3 252 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 T-ENOLP0DO92 83 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 MYL2P10916 166 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 ABOP16442 354 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 TSPAN8P19075 237 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 CNR1P21554 472 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 HTR1EP28566 365 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 ALDH3A1P30838 453 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 TLX1P31314 330 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 CCKARP32238 428 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SERPINB5P36952 375 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SOX3P41225 446 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SSR2P43308 183 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 CENPAP49450 140 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 NR0B1P51843 470 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 CCNG1P51959 295 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 RAP1GDS1P52306 607 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SMSP52788 366 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 HNRNPH2P55795 449 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 PHEXP78562 749 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 TNFRSF17Q02223 184 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 FOLH1Q04609 750 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 CRYZQ08257 329 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 FAM27E3Q08E93 113 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 DDX39BQ13838 428 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 KIAA0040Q15053 153 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 HSPB2Q16082 182 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 ZNF791Q3KP31 576 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 ZNF585BQ52M93 769 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 CMPK2Q5EBM0 449 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 PIGGQ5H8A4 983 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 CEP85LQ5SZL2 805 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 FAM69AQ5T7M9 428 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 CES4AQ5XG92 561 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 TYW3Q6IPR3 259 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 XKRXQ6PP77 449 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 OPN5Q6U736 354 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 RTL4Q6ZR62 310 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 RGS9BPQ6ZS82 235 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 Q6ZSR9 355 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 GPRIN3Q6ZVF9 776 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 NCCRP1Q6ZVX7 275 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 TBC1D26Q86UD7 250 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms