RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PPM1LQ5SGD2 360 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 CLVS2Q5SYC1 327 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 LPCAT4Q643R3 524 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 CCDC137Q6PK04 289 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 ZNF730Q6ZMV8 503 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 ZNF841Q6ZN19 808 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 PLEKHG7Q6ZR37 379 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 USP50Q70EL3 339 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 ARMCX2Q7L311 632 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 TAS2R42Q7RTR8 314 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 CDR2LQ86X02 465 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 CACUL1Q86Y37 369 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 LINC00518Q8N0U6 118 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 TTC5Q8N0Z6 440 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 BANPQ8N9N5 519 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 SNX31Q8N9S9 440 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 TTLQ8NG68 377 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 OR2L2Q8NH16 312 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 OR4A16Q8NH70 328 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 RNF139Q8WU17 664 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 U2AF1L4Q8WU68 220 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 TMEM186Q96B77 213 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 CMTM5Q96DZ9 223 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 TMEM80Q96HE8 168 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 BTN2A3PQ96KV6 586 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 SAMD8Q96LT4 415 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 ALKBH3Q96Q83 286 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 KCNK16Q96T55 309 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 SORT1Q99523 831 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 TXN2Q99757 166 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 COQ7Q99807 217 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 SLC29A1Q99808 456 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 AGPAT1Q99943 283 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 EDEM2Q9BV94 578 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 KIFC1Q9BW19 673 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 ANKRD60Q9BZ19 345 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 WWP1Q9H0M0 922 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 BOLA2Q9H3K6 86 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 FAM96AQ9H5X1 160 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 MOB1AQ9H8S9 216 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 JPT2Q9H910 190 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 UCK1Q9HA47 277 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 FBXO8Q9NRD0 319 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 FARSBQ9NSD9 589 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 TMOD2Q9NZR1 351 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 NARFQ9UHQ1 456 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 ATP6V1HQ9UI12 483 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 RIMS3Q9UJD0 308 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 MRTO4Q9UKD2 239 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 PRPF19Q9UMS4 504 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 SNX24Q9Y343 169 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 STRAPQ9Y3F4 350 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 OR1A2Q9Y585 309 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 UBE4BO95155 1302 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 C3P01024 1663 aa3.14□□□□□ -1.91
ECHDC1-217ENST00000488087 NALCNQ8IZF0 1738 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 NWD2Q9ULI1 1742 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 MYH6P13533 1939 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 A0A087X0T9 212 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 TRGV8A0A0C4DH27 118 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 SMCO2A6NFE2 343 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 ARHGAP42A6NI28 874 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 SAGE2PA6NJ88 616 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 OR6C65A6NJZ3 312 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 ACOD1A6NK06 481 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 ZNF487B1APH4 448 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 H7C0C1 242 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 hCG_2039718K7EN88 272 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 TLR4O00206 839 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 PSMD11O00231 422 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 TRDMT1O14717 391 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 NOL3O60936 208 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 NOL4O94818 638 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 PRAMEF12O95522 483 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 PTTG1O95997 202 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 PGK2P07205 417 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 APRTP07741 180 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 RETP07949 1114 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 H2AFZP0C0S5 128 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 TFPTP0C1Z6 253 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 NCF1P14598 390 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 GLRA1P23415 457 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 CD40LGP29965 261 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 EVI2BP34910 448 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 UGT2B10P36537 528 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 HPCAL1P37235 193 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 COILP38432 576 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 DDOSTP39656 456 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 ETV5P41161 510 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 GNPDA1P46926 289 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 ZFP36L2P47974 494 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 NUMBP49757 651 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 TAF6P49848 677 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 KLK7P49862 253 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 CNN1P51911 297 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 MAP3K7CLP57077 242 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 MRPS15P82914 257 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 ZNF33BQ06732 778 aa3.13□□□□□ -1.91
ECHDC1-217ENST00000488087 ORC2Q13416 577 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms