RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 GOLGA8MH3BSY2 632 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 ZNF195O14628 629 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 RGS16O15492 202 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 PPIHO43447 177 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 CNOT3O75175 753 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 CDK2AP2O75956 126 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 PIGRP01833 764 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 GCP02774 474 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 RHOCP08134 193 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 FAM157CP0CG43 387 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 PET100P0DJ07 73 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 IGHV4-30-4P0DP06 118 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 PGAM1P18669 254 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 CNR1P21554 472 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 NR4A1P22736 598 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 HTR2CP28335 458 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 TGM4P49221 684 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 RAG2P55895 527 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 RAB14P61106 215 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 REEP5Q00765 189 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 RAB40BQ12829 278 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 TRAF2Q12933 501 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 TRAF1Q13077 416 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 SRSF9Q13242 221 aaKnown RBP eCLIP4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 AKIRIN2Q53H80 203 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 ATP1A1-AS1Q5TC04 95 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 ZNF658Q5TYW1 1059 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 ASCL4Q6XD76 172 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 OR2W3Q7Z3T1 314 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 ERICH1Q86X53 443 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 SLC39A11Q8N1S5 342 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 CSNK1A1LQ8N752 337 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 CD99L2Q8TCZ2 262 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 ABTB1Q969K4 478 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 S100PBPQ96BU1 408 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 RTP4Q96DX8 246 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 ITCHQ96J02 903 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 B3GALT6Q96L58 329 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 ZFP3Q96NJ6 502 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 SERPINB11Q96P15 392 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 MCCC1Q96RQ3 725 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 ECSITQ9BQ95 431 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 PSD2Q9BQI7 771 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 SLC35A5Q9BS91 424 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 TIMM29Q9BSF4 260 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 GPR174Q9BXC1 333 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 TMPRSS5Q9H3S3 457 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 MRM3Q9HC36 420 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 NRN1Q9NPD7 142 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 TMEM30AQ9NV96 361 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 APOBEC3BQ9UH17 382 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 DCDC2Q9UHG0 476 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 POFUT2Q9Y2G5 429 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 PCDHGB1Q9Y5G3 927 aa4.48□□□□□ -1.69
R3HDM1-216ENST00000483065 A0A0A6YYD4 124 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 hCG_38984A0A1B0GV85 526 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 A0A1W2PPV9 198 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 MYMKA6NI61 221 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 GOLGA6L10A6NI86 522 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 MKRN2OSH3BPM6 223 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 SIVA1O15304 175 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 TOX3O15405 576 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 DENRO43583 198 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 XPNPEP2O43895 674 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 RAMP1O60894 148 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 ERLIN2O94905 339 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 NSA2O95478 260 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 F10P00742 488 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 CA1P00915 261 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 IGHG4P01861 327 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 HLA-DRAP01903 254 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 GAPDHP04406 335 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 STSP08842 583 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 SLC35E2BP0CK96 405 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 SLC35E2P0CK97 266 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 MLNP12872 115 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 MYOD1P15172 320 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 ABOP16442 354 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 IVDP26440 423 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 ZFP36P26651 326 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 EPHA2P29317 976 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 KDELR2P33947 212 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 TMED10P49755 219 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 RGS6P49758 472 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 HSPA2P54652 639 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 OR1D5P58170 312 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 SCRN3Q0VDG4 424 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 SLC17A1Q14916 467 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 SLC5A12Q1EHB4 618 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 PGGHGQ32M88 737 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 FAM106AQ4KMX7 169 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 WASHC2DQ5SRD0 308 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 DCAF12Q5T6F0 453 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 ZNF621Q6ZSS3 439 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 C5orf24Q7Z6I8 188 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 IFNEQ86WN2 208 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 CYB561A3Q8NBI2 242 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 ZNF248Q8NDW4 579 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 OR6K6Q8NGW6 343 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 OR6F1Q8NGZ6 308 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms