RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	RABL3	Q5HYI8	236 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	WIPI1	Q5MNZ9	446 aa	Predicted RBP	4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	FAM69A	Q5T7M9	428 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	LCN8	Q6JVE9	175 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	POMZP3	Q6PJE2	187 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	PAQR6	Q6TCH4	344 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	ARSK	Q6UWY0	536 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	TMPPE	Q6ZT21	453 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	FAM214B	Q7L5A3	538 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	YTHDF3	Q7Z739	585 aa	Known RBP	4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	ADGRG3	Q86Y34	549 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	RNF113B	Q8IZP6	322 aa	Known RBP	4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	OFCC1	Q8IZS5	231 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	LILRA2	Q8N149	483 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	CLEC4F	Q8N1N0	589 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	C10orf111	Q8N326	155 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	LINC00471	Q8N535	108 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	OR6K3	Q8NGY3	331 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	OR2V1	Q8NHB1	315 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	FBXO27	Q8NI29	283 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	NFKBID	Q8NI38	313 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	PIGX	Q8TBF5	258 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	PNPT1	Q8TCS8	783 aa	Known RBP	4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	ITLN2	Q8WWU7	325 aa	Predicted RBP	4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	GEMIN6	Q8WXD5	167 aa	Known RBP	4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	FIG4	Q92562	907 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	CNOT9	Q92600	299 aa	Known RBP	4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	PROX1	Q92786	737 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	MAL2	Q969L2	176 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	TMEM45B	Q96B21	275 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	C3orf49	Q96BT1	292 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	TAMM41	Q96BW9	452 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	ZBTB9	Q96C00	473 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	ASB9	Q96DX5	294 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	ZHX1-C8orf76	Q96EF9	292 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	SLC47A1	Q96FL8	570 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	THOC1	Q96FV9	657 aa	Known RBP	4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	NSL1	Q96IY1	281 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	DHRS1	Q96LJ7	313 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	JSRP1	Q96MG2	331 aa	Predicted RBP	4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	HS6ST2	Q96MM7	605 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	EPYC	Q99645	322 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	SPOCK3	Q9BQ16	436 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	ENKD1	Q9H0I2	346 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	DEFB127	Q9H1M4	99 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	SLC6A15	Q9H2J7	730 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	MAGIX	Q9H6Y5	334 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	EXO5	Q9H790	373 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	COQ10B	Q9H8M1	238 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	PLSCR4	Q9NRQ2	329 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	PNPLA3	Q9NST1	481 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	DCAF13	Q9NV06	445 aa	Known RBP	4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	ADPRHL2	Q9NX46	363 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	CMTM6	Q9NX76	183 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	ELOVL5	Q9NYP7	299 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	KLHL9	Q9P2J3	617 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	OSGIN1	Q9UJX0	560 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	SLC13A4	Q9UKG4	626 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	OSGIN2	Q9Y236	505 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	B3GALT5	Q9Y2C3	310 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	HRH3	Q9Y5N1	445 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	PLCE1	Q9P212	2302 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525	CENPE	Q02224	2701 aa		4.57	□□□□□ -1.68
HDAC6-223	ENST00000480525		A0A1W2PNV4	684 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525		A0A1W2PRQ8	180 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	TRAPPC13	A5PLN9	417 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	SLC22A20	A6NK97	555 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	AQP7P3	A6NL99	342 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	CLCA1	A8K7I4	914 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	FTCDNL1	E5RQL4	147 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525		G3V3Y1	287 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	CXCR6	O00574	342 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	AIM2	O14862	343 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	EFNA2	O43921	213 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	NME6	O75414	186 aa	Predicted RBP	4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	GMNN	O75496	209 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	TNFSF13	O75888	250 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	AGFG2	O95081	481 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	NUDT14	O95848	222 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	SEMG1	P04279	462 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	GPI	P06744	558 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	T-ENOL	P0DO92	83 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	UMPS	P11172	480 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	CD1E	P15812	388 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	PPP3CB	P16298	524 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	ITGA2	P17301	1181 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	SLC7A1	P30825	629 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	RFC3	P40938	356 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	MAGEA2	P43356	314 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	RFX3	P48380	749 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	IDH2	P48735	452 aa	Known RBP	4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	ASCL1	P50553	236 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	HMGA2	P52926	109 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	GYS2	P54840	703 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	CARD18	P57730	90 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	RGS8	P57771	180 aa	Predicted RBP	4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	SMIM11A	P58511	58 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	NCALD	P61601	193 aa		4.56	□□□□□ -1.68
HDAC6-223	ENST00000480525	ADORA2A-AS1	P86434	159 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms