RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 A0A087WUU8 490 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 SOCS6O14544 535 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 OIP5O43482 229 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 SH3BGRLO75368 114 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 UCHL1P09936 223 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 MPC1LP0DKB6 136 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 ITGA3P26006 1051 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 SDHAP31040 664 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 PTH2RP49190 550 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 P2RX1P51575 399 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 UBE2MP61081 183 aaKnown RBP12.81□□□□□ -0.36
HDAC1-206ENST00000476391 RNF4P78317 190 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 MC1RQ01726 317 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 PGGHGQ32M88 737 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 ANKRD39Q53RE8 183 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 NBPF12Q5TAG4 269 aaPredicted RBP12.81□□□□□ -0.36
HDAC1-206ENST00000476391 DMKNQ6E0U4 476 aaPredicted RBP12.81□□□□□ -0.36
HDAC1-206ENST00000476391 ACOT7LQ6ZUV0 252 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 BEST3Q8N1M1 668 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 ARRDC1Q8N5I2 433 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 C17orf47Q8NEP4 570 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 FBXO22Q8NEZ5 403 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 SKA2Q8WVK7 121 aaPredicted RBP12.81□□□□□ -0.36
HDAC1-206ENST00000476391 MYEOVQ96EZ4 313 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 SSX3Q99909 188 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 NRIP2Q9BQI9 281 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 SPON2Q9BUD6 331 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 CCDC86Q9H6F5 360 aaKnown RBP12.81□□□□□ -0.36
HDAC1-206ENST00000476391 MYNNQ9NPC7 610 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 HINT3Q9NQE9 182 aaKnown RBP12.81□□□□□ -0.36
HDAC1-206ENST00000476391 OR2T1O43869 369 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 RLN1P04808 185 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 ANXA2P07355 339 aaKnown RBP12.8□□□□□ -0.36
HDAC1-206ENST00000476391 TWF1Q12792 350 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 CBFBQ13951 182 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 KCNAB1Q14722 419 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 FAM71E1Q6IPT2 247 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 OR6T1Q8NGN1 323 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 OR4A4PQ8NGN8 299 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 OR6N1Q8NGY5 312 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 STOML3Q8TAV4 291 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 CLP1Q92989 425 aaKnown RBP12.8□□□□□ -0.36
HDAC1-206ENST00000476391 S100A16Q96FQ6 103 aaKnown RBP12.8□□□□□ -0.36
HDAC1-206ENST00000476391 SEPT5Q99719 369 aaPredicted RBP12.8□□□□□ -0.36
HDAC1-206ENST00000476391 OCSTAMPQ9BR26 566 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 NAA11Q9BSU3 229 aaPredicted RBP12.8□□□□□ -0.36
HDAC1-206ENST00000476391 TRMT61BQ9BVS5 477 aaKnown RBP12.8□□□□□ -0.36
HDAC1-206ENST00000476391 CXorf36Q9H7Y0 433 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 KCNK12Q9HB15 430 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 IL26Q9NPH9 171 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 SEMA4GQ9NTN9 838 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 DNAJC25-GNG10A0A024R161 153 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 GGT3PA6NGU5 568 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 OR5H14A6NHG9 310 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 FADS1O60427 444 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 ALPPL2P10696 532 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 NQO2P16083 231 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 NDUFB7P17568 137 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 NT5EP21589 574 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 NUBP1P53384 320 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 TLE2Q04725 743 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 PJVKQ0ZLH3 352 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 TEAD2Q15562 447 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 NDUFAF6Q330K2 333 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 PLEKHN1Q494U1 663 aaPredicted RBP12.8□□□□□ -0.36
HDAC1-206ENST00000476391 C11orf87Q6NUJ2 197 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 THOC6Q86W42 341 aaKnown RBP12.8□□□□□ -0.36
HDAC1-206ENST00000476391 CPOQ8IVL8 374 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 NXPE1Q8N323 547 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 OR10H5Q8NGA6 315 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 RNF141Q8WVD5 230 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 TMEM40Q8WWA1 233 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 TFGQ92734 400 aaPredicted RBP12.8□□□□□ -0.36
HDAC1-206ENST00000476391 EDAQ92838 391 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 RAB3CQ96E17 227 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 TAAR9Q96RI9 348 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 NEU1Q99519 415 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 SEC61A2Q9H9S3 476 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 CHMP1AQ9HD42 196 aaPredicted RBP12.8□□□□□ -0.36
HDAC1-206ENST00000476391 PRM3Q9NNZ6 103 aa12.8□□□□□ -0.36
HDAC1-206ENST00000476391 ATXN7L1Q9ULK2 861 aaPredicted RBP12.8□□□□□ -0.36
HDAC1-206ENST00000476391 TMEM189-UBE2V1I3L0A0 370 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 CLDN11O75508 207 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 IFNA10P01566 189 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 CD2P06729 351 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 MMP10P09238 476 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 RAB40ALP0C0E4 278 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 GNSP15586 552 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 TACR2P21452 398 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 RPS13P62277 151 aaKnown RBP12.79□□□□□ -0.36
HDAC1-206ENST00000476391 RPS26P62854 115 aaKnown RBP12.79□□□□□ -0.36
HDAC1-206ENST00000476391 SRSF4Q08170 494 aaKnown RBP12.79□□□□□ -0.36
HDAC1-206ENST00000476391 ELAVL2Q12926 359 aaKnown RBP12.79□□□□□ -0.36
HDAC1-206ENST00000476391 GPNMBQ14956 572 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 GFOD2Q3B7J2 385 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 TMEM69Q5SWH9 247 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 PRSS55Q6UWB4 352 aaPredicted RBP12.79□□□□□ -0.36
HDAC1-206ENST00000476391 COMMD6Q7Z4G1 85 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 TMEM99Q8N816 258 aa12.79□□□□□ -0.36
HDAC1-206ENST00000476391 C16orf78Q8WTQ4 265 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms