RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ATP12AP54707 1039 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 CDH15P55291 814 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 SESN3P58005 492 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 SNRPD2P62316 118 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 CSNK2A1P68400 391 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 SKP2Q13309 424 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 CBFBQ13951 182 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 MLC1Q15049 377 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 IQCCQ4KMZ1 466 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 TIGD2Q4W5G0 525 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 SYT14P1Q58G82 188 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 DCST2Q5T1A1 773 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 C9orf135Q5VTT2 229 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 CDC73Q6P1J9 531 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 LRIG3Q6UXM1 1119 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 CASP12Q6UXS9 341 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 RINLQ6ZS11 566 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 SLC46A3Q7Z3Q1 461 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 MTDHQ86UE4 582 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 RELL1Q8IUW5 271 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 SLC22A9Q8IVM8 553 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 C17orf78Q8N4C9 275 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 TMCO5AQ8N6Q1 288 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 C3orf56Q8N813 242 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 LINC01356Q8N9X3 169 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF540Q8NDQ6 660 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 C1orf162Q8NEQ5 155 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 TOR1AIP2Q8NFQ8 470 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 OR52E4Q8NGH9 312 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 RFWD2Q8NHY2 731 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 ZFP28Q8NHY6 868 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 ST8SIA1Q92185 356 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 PPCDCQ96CD2 204 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 CHMP6Q96FZ7 201 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 METTL2AQ96IZ6 378 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 FCRL1Q96LA6 429 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 CCT7Q99832 543 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 HOXD1Q9GZZ0 328 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 IQCGQ9H095 443 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 CDC42EP4Q9H3Q1 356 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 PIGUQ9H490 435 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 REEP4Q9H6H4 257 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 MID1IP1Q9NPA3 183 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 SLC17A5Q9NRA2 495 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 CA10Q9NS85 328 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 ZCCHC3Q9NUD5 404 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 SH3BP4Q9P0V3 963 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 TMEFF2Q9UIK5 374 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF180Q9UJW8 692 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 MOKQ9UQ07 419 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 TMA7Q9Y2S6 64 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 AMDHD2Q9Y303 409 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 DTNAQ9Y4J8 743 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 PTGDR2Q9Y5Y4 395 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 DNAH3Q8TD57 4116 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 IGHV1-18A0A0C4DH31 117 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 CENPVL1A0A0U1RR11 272 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 B9A039 149 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 FAM157AC9JC47 383 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 POC1B-GALNT4F8VUJ3 575 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 SULT2B1O00204 365 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 GPR171O14626 319 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF264O43296 627 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 DNPH1O43598 174 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 EIF4E2O60573 245 aaKnown RBP4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 MRPL33O75394 65 aaKnown RBP4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 SEC22BO75396 215 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 PDE5AO76074 875 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 STAMBPO95630 424 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 PMS2P2O95744 297 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 SDC1P18827 310 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 MPGP29372 298 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 SERPINF1P36955 418 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 PPOXP50336 477 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 IDH3GP51553 393 aaPredicted RBP4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 CHN2P52757 468 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 ACTG1P63261 375 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 H3F3AP84243 136 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 SLC7A5Q01650 507 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 MERTKQ12866 999 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 EFNB3Q15768 340 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 ADIPOQQ15848 244 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 COX20Q5RI15 118 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 PDZK1Q5T2W1 519 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 C1QTNF12Q5T7M4 302 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 TSPO2Q5TGU0 170 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 DEF8Q6ZN54 512 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 TIFABQ6ZNK6 161 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 FRMD7Q6ZUT3 714 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 SYT9Q86SS6 491 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 LCA5Q86VQ0 697 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 CCDC103Q8IW40 242 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 CCNYL1Q8N7R7 359 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF614Q8N883 585 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 FAM71CQ8NEG0 241 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 CLHC1Q8NHS4 586 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 PIGXQ8TBF5 258 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 SLC25A43Q8WUT9 341 aaPredicted RBP4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 ARL8AQ96BM9 186 aa4.46□□□□□ -1.7
SNRNP40-204ENST00000474025 ZHX1-C8orf76Q96EF9 292 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms