RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 RANBP3LQ86VV4 465 aaPredicted RBP5.38□□□□□ -1.55
USP39-213ENST00000467885 OFCC1Q8IZS5 231 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 CADM2Q8N3J6 435 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 TMEM251Q8N6I4 163 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 OR5M1Q8NGP8 315 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 ZNF563Q8TA94 476 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 GIPC3Q8TF64 312 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 TMEM255BQ8WV15 326 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 LIPHQ8WWY8 451 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 ACOT11Q8WXI4 607 aaPredicted RBP5.38□□□□□ -1.55
USP39-213ENST00000467885 ST8SIA1Q92185 356 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 MPP4Q96JB8 637 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 MRGPRX4Q96LA9 322 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 PRRC1Q96M27 445 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 JSRP1Q96MG2 331 aaPredicted RBP5.38□□□□□ -1.55
USP39-213ENST00000467885 HS6ST2Q96MM7 605 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 TAAR6Q96RI8 345 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 FEVQ99581 238 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 EPYCQ99645 322 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 SPOCK3Q9BQ16 436 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 OSBPL10Q9BXB5 764 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 ENKD1Q9H0I2 346 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 DEFB127Q9H1M4 99 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 RASSF4Q9H2L5 321 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 PTGES2Q9H7Z7 377 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 REEP1Q9H902 201 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 SMURF2Q9HAU4 748 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 C12orf10Q9HB07 376 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 CACYBPQ9HB71 228 aaKnown RBP5.38□□□□□ -1.55
USP39-213ENST00000467885 ZNF71Q9NQZ8 489 aaPredicted RBP5.38□□□□□ -1.55
USP39-213ENST00000467885 TAS2R10Q9NYW0 307 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 TESQ9UGI8 421 aaKnown RBP5.38□□□□□ -1.55
USP39-213ENST00000467885 TMEFF2Q9UIK5 374 aaPredicted RBP5.38□□□□□ -1.55
USP39-213ENST00000467885 TUBD1Q9UJT1 453 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 TP53TG5Q9Y2B4 290 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 C15orf41Q9Y2V0 281 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 KLF13Q9Y2Y9 288 aaPredicted RBP5.38□□□□□ -1.55
USP39-213ENST00000467885 TMED7Q9Y3B3 224 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 APC2O95996 2303 aa5.38□□□□□ -1.55
USP39-213ENST00000467885 ZZEF1O43149 2961 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 A0A1B0GVC2 190 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 TMEM72A0PK05 275 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 ZC3H12DA2A288 527 aaKnown RBP5.37□□□□□ -1.55
USP39-213ENST00000467885 OR2M5A3KFT3 312 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 HTR3EA5X5Y0 456 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 E9PQ18 207 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 SOCS2O14508 198 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 ADAMDEC1O15204 470 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 CHP2O43745 196 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 NUDT14O95848 222 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 OPN1LWP04000 364 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 TP53P04637 393 aaPredicted RBP5.37□□□□□ -1.55
USP39-213ENST00000467885 PNMTP11086 282 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 HK1P19367 917 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 MAKP20794 623 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 FPR1P21462 350 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 CBLP22681 906 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 CXCR1P25024 350 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 SRD5A2P31213 254 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 POLR2IP36954 125 aaKnown RBP5.37□□□□□ -1.55
USP39-213ENST00000467885 RFC3P40938 356 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 EIF1P41567 113 aaKnown RBP5.37□□□□□ -1.55
USP39-213ENST00000467885 RBM34P42696 430 aaKnown RBP5.37□□□□□ -1.55
USP39-213ENST00000467885 HTR3AP46098 478 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 PTDSS1P48651 473 aaKnown RBP5.37□□□□□ -1.55
USP39-213ENST00000467885 STARP49675 285 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 MEOX1P50221 254 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 POLR2HP52434 150 aaKnown RBP5.37□□□□□ -1.55
USP39-213ENST00000467885 MAP2K6P52564 334 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 SUCLG1P53597 346 aaKnown RBP5.37□□□□□ -1.55
USP39-213ENST00000467885 UGT2B15P54855 530 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 GFRA1P56159 465 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 CTBP2P56545 445 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 COPZ1P61923 177 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 PPP2R2BQ00005 443 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 MERTKQ12866 999 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 GK3PQ14409 553 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 ZNF169Q14929 603 aaPredicted RBP5.37□□□□□ -1.55
USP39-213ENST00000467885 LRRC36Q1X8D7 754 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 NADK2Q4G0N4 442 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 ALG10BQ5I7T1 473 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 ZNF324BQ6AW86 544 aaPredicted RBP5.37□□□□□ -1.55
USP39-213ENST00000467885 KDM4DQ6B0I6 523 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 FAHD1Q6P587 224 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 CD300LDQ6UXZ3 194 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 GRINAQ7Z429 371 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 STK32CQ86UX6 486 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 HIPK1Q86Z02 1210 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 ZDHHC13Q8IUH4 622 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 EPHX4Q8IUS5 362 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 P3H2Q8IVL5 708 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 SIAH3Q8IW03 269 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 GTPBP8Q8N3Z3 284 aaPredicted RBP5.37□□□□□ -1.55
USP39-213ENST00000467885 SVOPLQ8N434 492 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 CBR4Q8N4T8 237 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 LRRC17Q8N6Y2 441 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 Q8NA96 180 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 TMEM178AQ8NBL3 297 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 ICA1LQ8NDH6 482 aa5.37□□□□□ -1.55
USP39-213ENST00000467885 FAM83FQ8NEG4 500 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms