RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 ACVR1BP36896 505 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 RPL14P50914 215 aaKnown RBP18.31■□□□□ 0.52
CPNE1-219ENST00000440240 KRTAP1-1Q07627 177 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 CHI3L2Q15782 390 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 AGAP6Q5VW22 663 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 SAXO2Q658L1 398 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 ABLIM2Q6H8Q1 611 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 TNFAIP8L2Q6P589 184 aaPredicted RBP18.31■□□□□ 0.52
CPNE1-219ENST00000440240 TMEM108Q6UXF1 575 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.31■□□□□ 0.52
CPNE1-219ENST00000440240 DTX2Q86UW9 622 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 ANKRD46Q86W74 232 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 LRRC34Q8IZ02 419 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 NEURL3Q96EH8 262 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 PKNOX2Q96KN3 472 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 ABCA1O95477 2261 aa18.31■□□□□ 0.52
CPNE1-219ENST00000440240 CCT8L1PA6NM43 557 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 ZNF716A6NP11 495 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 IGHV4-39P01824 125 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 PTAFRP25105 342 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 CHI3L1P36222 383 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-219ENST00000440240 HTR3AP46098 478 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 KHKP50053 298 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 CLNS1AP54105 237 aaKnown RBP18.3■□□□□ 0.52
CPNE1-219ENST00000440240 PHC1P78364 1004 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 HPCAP84074 193 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 CASP8Q14790 479 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 NRF1Q16656 503 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 GPAT3Q53EU6 434 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 ARFGAP2Q8N6H7 521 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 MAPK1IP1LQ8NDC0 245 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 PIGXQ8TBF5 258 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 ZG16BQ96DA0 208 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 ARL5BQ96KC2 179 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 ASB6Q9NWX5 421 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 MARCOQ9UEW3 520 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-219ENST00000440240 ADAM21Q9UKJ8 722 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 TRAPPC4Q9Y296 219 aa18.3■□□□□ 0.52
CPNE1-219ENST00000440240 TLX2O43763 284 aaPredicted RBP18.29■□□□□ 0.52
CPNE1-219ENST00000440240 MRPL33O75394 65 aaKnown RBP18.29■□□□□ 0.52
CPNE1-219ENST00000440240 IGHV3-9P01782 118 aa18.29■□□□□ 0.52
CPNE1-219ENST00000440240 LBPP18428 481 aa18.29■□□□□ 0.52
CPNE1-219ENST00000440240 S100A3P33764 101 aa18.29■□□□□ 0.52
CPNE1-219ENST00000440240 SLC16A1P53985 500 aa18.29■□□□□ 0.52
CPNE1-219ENST00000440240 CDH11P55287 796 aa18.29■□□□□ 0.52
CPNE1-219ENST00000440240 OR7E24Q6IFN5 339 aa18.29■□□□□ 0.52
CPNE1-219ENST00000440240 KLHL17Q6TDP4 642 aa18.29■□□□□ 0.52
CPNE1-219ENST00000440240 FRRS1Q6ZNA5 592 aa18.29■□□□□ 0.52
CPNE1-219ENST00000440240 DNM1P46Q6ZS02 220 aa18.29■□□□□ 0.52
CPNE1-219ENST00000440240 ADGRG3Q86Y34 549 aa18.29■□□□□ 0.52
CPNE1-219ENST00000440240 SSU72Q9NP77 194 aaKnown RBP18.29■□□□□ 0.52
CPNE1-219ENST00000440240 NPAP1Q9NZP6 1156 aa18.29■□□□□ 0.52
CPNE1-219ENST00000440240 TMEM181Q9P2C4 612 aa18.29■□□□□ 0.52
CPNE1-219ENST00000440240 TM9SF1O15321 606 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 RGS16O15492 202 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-219ENST00000440240 EIF1BO60739 113 aaKnown RBP18.28■□□□□ 0.52
CPNE1-219ENST00000440240 NDUFS7O75251 213 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 RAD51DO75771 328 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 MAGEA8P43361 318 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 SLC1A6P48664 564 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 IDH2P48735 452 aaKnown RBP18.28■□□□□ 0.52
CPNE1-219ENST00000440240 ANXA11P50995 505 aaKnown RBP18.28■□□□□ 0.52
CPNE1-219ENST00000440240 MAP2K6P52564 334 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 TXNL4AP83876 142 aaKnown RBP18.28■□□□□ 0.52
CPNE1-219ENST00000440240 CHRNEQ04844 493 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 SPANXN4Q5MJ08 99 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 WDR93Q6P2C0 686 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 CMIPQ8IY22 773 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 DEPDC4Q8N2C3 294 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 PIAS4Q8N2W9 510 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-219ENST00000440240 OR52N5Q8NH56 324 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 PMM1Q92871 262 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 ADAD1Q96M93 576 aaKnown RBP18.28■□□□□ 0.52
CPNE1-219ENST00000440240 MUS81Q96NY9 551 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 SLC35A5Q9BS91 424 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 C20orf27Q9GZN8 174 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 PARPBPQ9NWS1 579 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 TAS2R16Q9NYV7 291 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 BTNL2Q9UIR0 455 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 ALPK2Q86TB3 2170 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 PLCE1Q9P212 2302 aa18.28■□□□□ 0.52
CPNE1-219ENST00000440240 E9PBE3 544 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 ADAM11O75078 769 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 BCAS1O75363 584 aaPredicted RBP18.27■□□□□ 0.52
CPNE1-219ENST00000440240 TTKP33981 857 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 OR2B6P58173 313 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 H3F3AP84243 136 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 FUT5Q11128 374 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 GNA13Q14344 377 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 KRT71Q3SY84 523 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 FAM174BQ3ZCQ3 159 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 SLC22A25Q6T423 547 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 TRIML2Q8N7C3 387 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 DDIT4LQ96D03 193 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 CCDC115Q96NT0 180 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 TRNT1Q96Q11 434 aaKnown RBP18.27■□□□□ 0.52
CPNE1-219ENST00000440240 RHNO1Q9BSD3 238 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 NUF2Q9BZD4 464 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 OR11A1Q9GZK7 315 aa18.27■□□□□ 0.52
CPNE1-219ENST00000440240 MTHFD2LQ9H903 347 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms