RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 PRR23D1E9PI22 279 aaPredicted RBP17.32■□□□□ 0.36
USP39-202ENST00000409025 FLRT2O43155 660 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 PRR23D2P0DMB1 279 aaPredicted RBP17.32■□□□□ 0.36
USP39-202ENST00000409025 PEPDP12955 493 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 CCL4P13236 92 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 ZNF3P17036 446 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 ITPKBP27987 946 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 EVI2BP34910 448 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 ATP6V1E1P36543 226 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 TUBA1BP68363 451 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 EFR3AQ14156 821 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 DOC2BQ14184 412 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 SSX1Q16384 188 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 NIPAL3Q6P499 406 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 USP43Q70EL4 1123 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 TUBA1AQ71U36 451 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 MEPCEQ7L2J0 689 aaKnown RBP17.32■□□□□ 0.36
USP39-202ENST00000409025 SHFQ7M4L6 423 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 ADCK1Q86TW2 530 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 ATCAYQ86WG3 371 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 AMER2Q8N7J2 671 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 CHCHD6Q9BRQ6 235 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 DCSTAMPQ9H295 470 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 WDR54Q9H977 334 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 TRBV11-1A0A0K0K1C0 115 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 FADS1O60427 444 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 NADKO95544 446 aaPredicted RBP17.31■□□□□ 0.36
USP39-202ENST00000409025 IFNGP01579 166 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 ZNF28P17035 718 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 TGFBR1P36897 503 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 ENTPD1P49961 510 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 WNT4P56705 351 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 ZBTB46Q86UZ6 589 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 LRRC17Q8N6Y2 441 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 KBTBD8Q8NFY9 601 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 OR4F15Q8NGB8 312 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 OR5L2Q8NGL0 311 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 OR9Q1Q8NGQ5 310 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 MED20Q9H944 212 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 LRRN3E7EW58 273 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 SCO2O43819 266 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 PGCP20142 388 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 PAICSP22234 425 aaKnown RBP17.31■□□□□ 0.36
USP39-202ENST00000409025 MST1P26927 711 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 TACR3P29371 465 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 SOX3P41225 446 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 ITGADQ13349 1161 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 ARMC4Q5T2S8 1044 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 FCRLBQ6BAA4 426 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 SLC37A3Q8NCC5 494 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 PSD4Q8NDX1 1056 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 OR8K3Q8NH51 312 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 OR5W2Q8NH69 310 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 LRFN5Q96NI6 719 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 ERMAPQ96PL5 475 aaPredicted RBP17.31■□□□□ 0.36
USP39-202ENST00000409025 DEPDC7Q96QD5 511 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 ADAM19Q9H013 955 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 AKIRIN1Q9H9L7 192 aaPredicted RBP17.31■□□□□ 0.36
USP39-202ENST00000409025 PLGRKTQ9HBL7 147 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 TNFRSF10DQ9UBN6 386 aa17.31■□□□□ 0.36
USP39-202ENST00000409025 GMFGO60234 142 aa17.3■□□□□ 0.36
USP39-202ENST00000409025 NUDT14O95848 222 aa17.3■□□□□ 0.36
USP39-202ENST00000409025 SLC26A5P58743 744 aa17.3■□□□□ 0.36
USP39-202ENST00000409025 TMED1Q13445 227 aa17.3■□□□□ 0.36
USP39-202ENST00000409025 CBFBQ13951 182 aa17.3■□□□□ 0.36
USP39-202ENST00000409025 C16orf47Q6ZP98 133 aaPredicted RBP17.3■□□□□ 0.36
USP39-202ENST00000409025 C10orf53Q8N6V4 93 aa17.3■□□□□ 0.36
USP39-202ENST00000409025 OR5M3Q8NGP4 307 aa17.3■□□□□ 0.36
USP39-202ENST00000409025 THAP3Q8WTV1 239 aaPredicted RBP17.3■□□□□ 0.36
USP39-202ENST00000409025 MR1Q95460 341 aa17.3■□□□□ 0.36
USP39-202ENST00000409025 C8orf44Q96CB5 159 aa17.3■□□□□ 0.36
USP39-202ENST00000409025 OSGIN1Q9UJX0 560 aa17.3■□□□□ 0.36
USP39-202ENST00000409025 IGHA1P01876 353 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 LIMS3P0CW19 117 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 LIMS4P0CW20 117 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 RPL4P36578 427 aaKnown RBP17.29■□□□□ 0.36
USP39-202ENST00000409025 P2RX1P51575 399 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 PRPS1P60891 318 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 KLHL12Q53G59 568 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 ZNF362Q5T0B9 420 aaPredicted RBP17.29■□□□□ 0.36
USP39-202ENST00000409025 DPY19L2P2Q6ZN68 376 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 PTP4A1Q93096 173 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 CENPOQ9BU64 300 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 HCAR1Q9BXC0 346 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 ULBP3Q9BZM4 244 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 ISYNA1Q9NPH2 558 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 SLC39A1Q9NY26 324 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 AKAP7Q9P0M2 348 aaPredicted RBP17.29■□□□□ 0.36
USP39-202ENST00000409025 CHRNA9Q9UGM1 479 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 KLHL21Q9UJP4 597 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 LNP1A1A4G5 178 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 SLC22A31A6NKX4 558 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 C9J4A7 227 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 MCIDASD6RGH6 385 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 WWP2O00308 870 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 CDC40O60508 579 aaKnown RBP eCLIP17.29■□□□□ 0.36
USP39-202ENST00000409025 ZFAND5O76080 213 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 INHBBP09529 407 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 GP1BBP13224 206 aa17.29■□□□□ 0.36
USP39-202ENST00000409025 PSMA1P25786 263 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms