RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ZNF160Q9HCG1 818 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 EXOSC3Q9NQT5 275 aaKnown RBP13.82□□□□□ -0.2
SCAF11-204ENST00000395454 DNAJC27Q9NZQ0 273 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 OR6C76A6NM76 312 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 MASP2O00187 686 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 TLX2O43763 284 aaPredicted RBP13.82□□□□□ -0.2
SCAF11-204ENST00000395454 PTHP01270 115 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 TBXA2RP21731 343 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 FXYD6P3P58550 94 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 PSPHP78330 225 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 EBPQ15125 230 aaKnown RBP13.82□□□□□ -0.2
SCAF11-204ENST00000395454 TMEM44Q2T9K0 475 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 BTBD16Q32M84 506 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 PGGHGQ32M88 737 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 MEX3DQ86XN8 651 aaKnown RBP13.82□□□□□ -0.2
SCAF11-204ENST00000395454 SLC43A2Q8N370 569 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 ZNF441Q8N8Z8 693 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 LRR1Q96L50 414 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 ZNF582Q96NG8 517 aaPredicted RBP13.82□□□□□ -0.2
SCAF11-204ENST00000395454 IP6K3Q96PC2 410 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 SLC38A2Q96QD8 506 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 ZNF700Q9H0M5 742 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 NXF5Q9H1B4 397 aaKnown RBP13.82□□□□□ -0.2
SCAF11-204ENST00000395454 UBQLN4Q9NRR5 601 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 COPS7AQ9UBW8 275 aa13.82□□□□□ -0.2
SCAF11-204ENST00000395454 LSM2Q9Y333 95 aaKnown RBP13.82□□□□□ -0.2
SCAF11-204ENST00000395454 ATMQ13315 3056 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 TPRP12270 2363 aaKnown RBP13.81□□□□□ -0.2
SCAF11-204ENST00000395454 SURF4O15260 269 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 PRODHO43272 600 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 MAN1A2O60476 641 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 MAKP20794 623 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 LIPAP38571 399 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 GPR143P51810 404 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 SLC26A5P58743 744 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 NNATQ16517 81 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 TIGD6Q17RP2 521 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 ULK3Q6PHR2 472 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 OR1N1Q8NGS0 311 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 DCUN1D5Q9BTE7 237 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 NUDT9Q9BW91 350 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 TSSK6Q9BXA6 273 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 RACGAP1Q9H0H5 632 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 MEPEQ9NQ76 525 aaPredicted RBP13.81□□□□□ -0.2
SCAF11-204ENST00000395454 C20orf141Q9NUB4 165 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 TBC1D23Q9NUY8 699 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 PPIEQ9UNP9 301 aaKnown RBP13.81□□□□□ -0.2
SCAF11-204ENST00000395454 DIMT1Q9UNQ2 313 aaKnown RBP13.81□□□□□ -0.2
SCAF11-204ENST00000395454 MED31Q9Y3C7 131 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 PCSK5Q92824 1860 aa13.81□□□□□ -0.2
SCAF11-204ENST00000395454 DSPP15924 2871 aaKnown RBP13.81□□□□□ -0.2
SCAF11-204ENST00000395454 A0A1W2PQ72 361 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 UNC119BA6NIH7 251 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 HPP00738 406 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 IGF2P01344 180 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 NGFRP08138 427 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 RFX3P48380 749 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 TLE3Q04726 772 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 CDC20Q12834 499 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 SPCS2Q15005 226 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 SNAPC1Q16533 368 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 LINC00299Q6ZSB3 139 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 SLC46A3Q7Z3Q1 461 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 C9orf40Q8IXQ3 194 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 APCDD1LQ8NCL9 501 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 OR2T33Q8NG76 320 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 THAP4Q8WY91 577 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 TMEM80Q96HE8 168 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 LMF1Q96S06 567 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 MRTO4Q9UKD2 239 aaKnown RBP13.8□□□□□ -0.2
SCAF11-204ENST00000395454 BOD1L1Q8NFC6 3051 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 EXPH5Q8NEV8 1989 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 IRGMA1A4Y4 181 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 HTR3EA5X5Y0 456 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 SNTNA6NMZ2 147 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 BHLHE40O14503 412 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 CSTAP01040 98 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 HMGN1P05114 100 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 CD36P16671 472 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 ZNF182P17025 639 aaPredicted RBP13.8□□□□□ -0.2
SCAF11-204ENST00000395454 ITPKBP27987 946 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 EXT1Q16394 746 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 DCAF10Q5QP82 559 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 AADACL4Q5VUY2 407 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 ZNF614Q8N883 585 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 ZNF527Q8NB42 609 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 NFAM1Q8NET5 270 aaPredicted RBP13.8□□□□□ -0.2
SCAF11-204ENST00000395454 PFN4Q8NHR9 129 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 DNAJA4Q8WW22 397 aaPredicted RBP13.8□□□□□ -0.2
SCAF11-204ENST00000395454 BPIFA2Q96DR5 249 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 IMMP1LQ96LU5 166 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 TAPBPLQ9BX59 468 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 TEX12Q9BXU0 123 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 UBQLN3Q9H347 655 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 HHATLQ9HCP6 504 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 FGF20Q9NP95 211 aaPredicted RBP13.8□□□□□ -0.2
SCAF11-204ENST00000395454 SIGLEC7Q9Y286 467 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 SSUH2Q9Y2M2 353 aa13.8□□□□□ -0.2
SCAF11-204ENST00000395454 MED13Q9UHV7 2174 aa13.79□□□□□ -0.2
SCAF11-204ENST00000395454 TAF4O00268 1085 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms