RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 RGMAQ96B86 450 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 BCL2L14Q9BZR8 327 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 GABARAPL1Q9H0R8 117 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 NOX4Q9NPH5 578 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 PLCXD1Q9NUJ7 323 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 FBXO4Q9UKT5 387 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 COLQQ9Y215 455 aaPredicted RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 CCL26Q9Y258 94 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 GPR55Q9Y2T6 319 aaPredicted RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 A3GALT2U3KPV4 340 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 TRBV5-3A0A0A0MS03 114 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 OR2W5A6NFC9 320 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 METTL12A8MUP2 240 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 GCM2O75603 506 aaPredicted RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 ARL6IP5O75915 188 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 HMGN1P05114 100 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 PSMB1P20618 241 aaKnown RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 CTNNB1P35222 781 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 CCR8P51685 355 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 CRYBA2P53672 197 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 OR2B8PP59922 312 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 ZNF616Q08AN1 781 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 PON3Q15166 354 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 LAMTOR1Q6IAA8 161 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 ATRAIDQ6UW56 229 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 SLC35D2Q76EJ3 337 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 RANBP3LQ86VV4 465 aaPredicted RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 SLC16A11Q8NCK7 471 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 SP7Q8TDD2 431 aaPredicted RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 GNPDA2Q8TDQ7 276 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 IGSF21Q96ID5 467 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 GAL3ST4Q96RP7 486 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 SYNDIG1Q9H7V2 258 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 NEUROD4Q9HD90 331 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 KLHL9Q9P2J3 617 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 ADAM18Q9Y3Q7 739 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 ATG4BQ9Y4P1 393 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 IRGMA1A4Y4 181 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 WASH4PA8MWX3 477 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 GPR89AB7ZAQ6 455 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 F5H5P2 479 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 GRM6O15303 877 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 MPC2O95563 127 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 RPN2P04844 631 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 SNRNP70P08621 437 aaKnown RBP8.19□□□□□ -1.1
RTN4-206ENST00000394611 GPR89BP0CG08 455 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 HOXB3P14651 431 aaPredicted RBP8.19□□□□□ -1.1
RTN4-206ENST00000394611 CSRP3P50461 194 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 ELAVL2Q12926 359 aaKnown RBP8.19□□□□□ -1.1
RTN4-206ENST00000394611 AGERQ15109 404 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 DEFB110Q30KQ9 67 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 AFMIDQ63HM1 303 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 JAZF1Q86VZ6 243 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 SLC39A11Q8N1S5 342 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 TBC1D19Q8N5T2 526 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 ESX1Q8N693 406 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 PLD4Q96BZ4 506 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 SENP5Q96HI0 755 aaPredicted RBP8.19□□□□□ -1.1
RTN4-206ENST00000394611 FCRL1Q96LA6 429 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 CMSS1Q9BQ75 279 aaKnown RBP8.19□□□□□ -1.1
RTN4-206ENST00000394611 CA10Q9NS85 328 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 NEUROG3Q9Y4Z2 214 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 IER3IP1Q9Y5U9 82 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 PLPP1O14494 284 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 SOD1P00441 154 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 ASGR2P07307 311 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 ACADMP11310 421 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 LAG3P18627 525 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 CR2P20023 1033 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 UBE2IP63279 158 aaKnown RBP8.19□□□□□ -1.1
RTN4-206ENST00000394611 GNA13Q14344 377 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 PGGHGQ32M88 737 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 CDNFQ49AH0 187 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 TMEM91Q6ZNR0 172 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 SLC51BQ86UW2 128 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 ZNF563Q8TA94 476 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 OR5P2Q8WZ92 322 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 NSMAFQ92636 917 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 SLC6A18Q96N87 628 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 HCAR1Q9BXC0 346 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 PRO3102Q9H379 93 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 LIN7BQ9HAP6 207 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 SLC6A20Q9NP91 592 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 MAN2C1Q9NTJ4 1040 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 VWA8A3KMH1 1905 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 FITM1A5D6W6 292 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 HMGN4O00479 90 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 TMPRSS11DO60235 418 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 PI3P19957 117 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 TEAD1P28347 426 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 GZMMP51124 257 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 EPHA4P54764 986 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 SEC13P55735 322 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 RING1Q06587 406 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 AIMP2Q13155 320 aaKnown RBP8.19□□□□□ -1.1
RTN4-206ENST00000394611 HBMQ6B0K9 141 aa8.19□□□□□ -1.1
RTN4-206ENST00000394611 ZNF322Q6U7Q0 402 aaPredicted RBP8.19□□□□□ -1.1
RTN4-206ENST00000394611 SLCO4C1Q6ZQN7 724 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms