RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 TTKP33981 857 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 PSPHP78330 225 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 COL28A1Q2UY09 1125 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 ZNF829Q3KNS6 432 aaPredicted RBP11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 XAF1Q6GPH4 301 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 IL20RBQ6UXL0 311 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 CASP12Q6UXS9 341 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 ZNF620Q6ZNG0 422 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 ATG4DQ86TL0 474 aaPredicted RBP11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 SPARTQ8N0X7 666 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 SCAIQ8N9R8 606 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 ZNF540Q8NDQ6 660 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 OR51A7Q8NH64 312 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 SLC22A8Q8TCC7 542 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 ZNF566Q969W8 418 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 SPACA9Q96E40 222 aaPredicted RBP11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 HS6ST2Q96MM7 605 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 DCUN1D5Q9BTE7 237 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 TSSK6Q9BXA6 273 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 KRCC1Q9NPI7 259 aaPredicted RBP11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 KLRF1Q9NZS2 232 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 ERVK-18Q9QC07 812 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 IGKV1D-42A0A075B6H8 117 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 ELOA3DA6NLF2 546 aaPredicted RBP11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 PRKYO43930 277 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 EIF4E2O60573 245 aaKnown RBP11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 CCDC159P0C7I6 412 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 SLC1A3P43003 542 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 NOVA1P51513 510 aaKnown RBP11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 P2RX1P51575 399 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 CTBP2P56545 445 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 TGIF1Q15583 401 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 INPP5JQ15735 1006 aaPredicted RBP11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 ELOA3BQ3SY89 546 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 NUP54Q7Z3B4 507 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 CDK20Q8IZL9 346 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 SIRT6Q8N6T7 355 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 LRRC17Q8N6Y2 441 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 ELOA3Q8NG57 546 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 OR4Q3Q8NH05 313 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 OR5W2Q8NH69 310 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 SNRNP27Q8WVK2 155 aaKnown RBP11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 LHPPQ9H008 270 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 OR52D1Q9H346 318 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 IL20Q9NYY1 176 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 DNAJC27Q9NZQ0 273 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 MED11Q9P086 117 aa11.11□□□□□ -0.63
SPTBN1-203ENST00000389980 ALPK2Q86TB3 2170 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 A0A1W2PQ72 361 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 EFCAB9A8MZ26 197 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 TM4SF5O14894 197 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 TLX2O43763 284 aaPredicted RBP11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 ATE1O95260 518 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 NAGAP17050 411 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 PTGDSP41222 190 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 RBM34P42696 430 aaKnown RBP11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 TMED10P49755 219 aaKnown RBP11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 GAS1P54826 345 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 TOP3AQ13472 1001 aaPredicted RBP11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 NTRK2Q16620 822 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 GXYLT1Q4G148 440 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 B3GNTL1Q67FW5 361 aaPredicted RBP11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 SLC27A4Q6P1M0 643 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 THSD4Q6ZMP0 1018 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 TMPRSS11FQ6ZWK6 438 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 AHSA2Q719I0 299 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 MRGPREQ86SM8 312 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 TMPRSS12Q86WS5 348 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 CACTIN-AS1Q8N1I8 211 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 FANK1Q8TC84 345 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 GPR119Q8TDV5 335 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 NPAS1Q99742 590 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 METTL7AQ9H8H3 244 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 INIPQ9NRY2 104 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 GPR52Q9Y2T5 361 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 CDH10Q9Y6N8 788 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 LAMA5O15230 3695 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 ENTPD6O75354 484 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 PGCP20142 388 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 CSRP1P21291 193 aaKnown RBP11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 NR4A1P22736 598 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 S100A1P23297 94 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 SLC6A8P48029 635 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 SMSP52788 366 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 LIMK1P53667 647 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 CXCR4P61073 352 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 SLC35A2P78381 396 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 MVKQ03426 396 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 EGR4Q05215 589 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 DBPQ10586 325 aaPredicted RBP11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 ATP1A4Q13733 1029 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 CBFBQ13951 182 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 QPRTQ15274 297 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 SNAPC1Q16533 368 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 ZNF791Q3KP31 576 aaPredicted RBP11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 PRAMEF20Q5VT98 475 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 RPS19BP1Q86WX3 136 aaKnown RBP11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 IL22RA1Q8N6P7 574 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 TTC9Q92623 222 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 NKD1Q969G9 470 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms