RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 DCKP27707 260 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 CTNNA1P35221 906 aaKnown RBP-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 APLNRP35414 380 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 COG2Q14746 738 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 ZRSR2Q15696 482 aaKnown RBP-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 SLX4IPQ5VYV7 408 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 KRT80Q6KB66 452 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 BTNL3Q6UXE8 466 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 CCDC36Q8IYA8 594 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 CCDC54Q8NEL0 328 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 OR10G3Q8NGC4 313 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 LINC01560Q8TB33 94 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 N4BP2L2Q92802 583 aaPredicted RBP-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 DUS3LQ96G46 650 aaKnown RBP-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 CELF6Q96J87 481 aaKnown RBP-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 CSPG4P5Q96PW8 444 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 NLNQ9BYT8 704 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 SELENOIQ9C0D9 397 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 DHX33Q9H6R0 707 aaKnown RBP-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 CNOT2Q9NZN8 540 aaKnown RBP-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 GMPPBQ9Y5P6 360 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 CELSR1Q9NYQ6 3014 aa-0.78□□□□□ -2.53
MIR548A3-201ENST00000385297 SDK1Q7Z5N4 2213 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 TICRRQ7Z2Z1 1910 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 H0YHG0 523 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 BUB1O43683 1085 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 LCA5LO95447 670 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 LGI1O95970 557 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 SERPINF2P08697 491 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 INAFM2P0DMQ5 153 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 CAPN3P20807 821 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 BDNFP23560 247 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 CXCL12P48061 93 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 ARRB1P49407 418 aaPredicted RBP-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 HERV-K104P63124 156 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 FUT5Q11128 374 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 KIAA0087Q14695 138 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 UBE2V2Q15819 145 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 GUCA2BQ16661 112 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 ALFQ53S48 1182 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 CASC4Q6P4E1 433 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 CWC27Q6UX04 472 aaKnown RBP-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 TMIGD1Q6UXZ0 262 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 C16orf47Q6ZP98 133 aaPredicted RBP-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 VSTM4Q8IW00 320 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 UBLCP1Q8WVY7 318 aaPredicted RBP-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 ART4Q93070 314 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 RAB39BQ96DA2 213 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 VMP1Q96GC9 406 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 CAMK2N2Q96S95 79 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 CITED1Q99966 193 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 SDF4Q9BRK5 362 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 C20orf85Q9H1P6 137 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 ACOXLQ9NUZ1 547 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 BCCIPQ9P287 314 aaKnown RBP eCLIP-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 CLCF1Q9UBD9 225 aa-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 MCTS1Q9ULC4 181 aaKnown RBP-0.79□□□□□ -2.54
MIR548A3-201ENST00000385297 TMEM120BA0PK00 339 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 PRSS37A4D1T9 235 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 HTR3EA5X5Y0 456 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 SLC31A2O15432 143 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 STK17BO94768 372 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 S1PR2O95136 353 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 RLN1P04808 185 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 OR56A5P0C7T3 313 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 ZNF35P13682 527 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 ZNF30P17039 623 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 ACTN2P35609 894 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 NPY2RP49146 381 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 ANKRD20A8PQ5CZ79 823 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 LRRC38Q5VT99 294 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 LIPNQ5VXI9 398 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 ZFP1Q6P2D0 407 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 Q6ZRN7 208 aaPredicted RBP-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 ACOT7LQ6ZUV0 252 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 PRPF39Q86UA1 669 aaKnown RBP-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 OR9G1Q8NH87 305 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 PAQR8Q8TEZ7 354 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 DNASE1L2Q92874 299 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 PEX13Q92968 403 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 WFIKKN1Q96NZ8 548 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 CYP2S1Q96SQ9 504 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 RETNLBQ9BQ08 111 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 SPATA16Q9BXB7 569 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 POLD4Q9HCU8 107 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 FBXO6Q9NRD1 293 aaPredicted RBP-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 NSMCE4AQ9NXX6 385 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 MIOXQ9UGB7 285 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 R4GN34 69 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 SHROOM4Q9ULL8 1493 aa-0.8□□□□□ -2.54
MIR548A3-201ENST00000385297 THADAQ6YHU6 1953 aa-0.81□□□□□ -2.54
MIR548A3-201ENST00000385297 ITIH6Q6UXX5 1313 aa-0.81□□□□□ -2.54
MIR548A3-201ENST00000385297 HSFX4A0A1B0GTS1 333 aaPredicted RBP-0.81□□□□□ -2.54
MIR548A3-201ENST00000385297 HSFX3A0A1B0GWH4 333 aaPredicted RBP-0.81□□□□□ -2.54
MIR548A3-201ENST00000385297 LOC105371045A0A1W2PR82 267 aa-0.81□□□□□ -2.54
MIR548A3-201ENST00000385297 ZNF320A2RRD8 509 aa-0.81□□□□□ -2.54
MIR548A3-201ENST00000385297 ARHGEF35A5YM69 484 aa-0.81□□□□□ -2.54
MIR548A3-201ENST00000385297 A6NIZ1 184 aa-0.81□□□□□ -2.54
MIR548A3-201ENST00000385297 CHEK1O14757 476 aa-0.81□□□□□ -2.54
MIR548A3-201ENST00000385297 XPO1O14980 1071 aaKnown RBP-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms