RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 SIX4Q9UIU6 781 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 POLHQ9Y253 713 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 ANKRD26Q9UPS8 1709 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 TMX2-CTNND1H3BSU7 103 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 TYROBPO43914 113 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 SIRPAP78324 504 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 COX15Q7KZN9 410 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 TMEM135Q86UB9 458 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 MRGPRX2Q96LB1 330 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 MBOAT4Q96T53 435 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 TMEM43Q9BTV4 400 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 MRPL22Q9NWU5 206 aaKnown RBP11.33□□□□□ -0.6
PCF11-201ENST00000298281 TXNL4BQ9NX01 149 aaKnown RBP11.33□□□□□ -0.6
PCF11-201ENST00000298281 PARP4Q9UKK3 1724 aaKnown RBP11.33□□□□□ -0.6
PCF11-201ENST00000298281 CBY3A6NI87 242 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 AGAP14A8MT82 685 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 ADH4P08319 380 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 TRAPPC2P0DI81 140 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 TRAPPC2BP0DI82 140 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 TPT1P13693 172 aaKnown RBP11.33□□□□□ -0.6
PCF11-201ENST00000298281 IL13RA1P78552 427 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 HUS1BQ8NHY5 278 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 SLC39A7Q92504 469 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 NELL2Q99435 816 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 OR1A2Q9Y585 309 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 NUP214P35658 2090 aaPredicted RBP11.33□□□□□ -0.6
PCF11-201ENST00000298281 ZNF732B4DXR9 585 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 CER1O95813 267 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 TRHRP34981 398 aaPredicted RBP11.33□□□□□ -0.6
PCF11-201ENST00000298281 EXOSC2Q13868 293 aaKnown RBP11.33□□□□□ -0.6
PCF11-201ENST00000298281 SNTB1Q13884 538 aaKnown RBP11.33□□□□□ -0.6
PCF11-201ENST00000298281 CST6Q15828 149 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 SFT2D3Q587I9 215 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 SFRP4Q6FHJ7 346 aaPredicted RBP11.33□□□□□ -0.6
PCF11-201ENST00000298281 MFSD12Q6NUT3 480 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 CCDC71Q8IV32 467 aaPredicted RBP11.33□□□□□ -0.6
PCF11-201ENST00000298281 OR52N2Q8NGI0 321 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 NICN1Q9BSH3 213 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 OR11A1Q9GZK7 315 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 PPIL3Q9H2H8 161 aaKnown RBP11.33□□□□□ -0.6
PCF11-201ENST00000298281 OBP2AQ9NY56 170 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 ASB4Q9Y574 426 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 ACPPP15309 386 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 ZNF17P17021 662 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 ENPP1P22413 925 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 UBE2KP61086 200 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 CAMKMTQ7Z624 323 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 C14orf80Q86SX3 495 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 NHLRC2Q8NBF2 726 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 C7orf43Q8WVR3 580 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 BOD1Q96IK1 185 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 TMEM208Q9BTX3 173 aa11.33□□□□□ -0.6
PCF11-201ENST00000298281 RPS10-NUDT3A0A1W2PQS6 291 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 ARPC5O15511 151 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 RPS10P46783 165 aaKnown RBP11.32□□□□□ -0.6
PCF11-201ENST00000298281 SPINT3P49223 89 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 NPY5RQ15761 445 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 LYSMD4Q5XG99 296 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 OR6F1Q8NGZ6 308 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 BIRC8Q96P09 236 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 RNF32Q9H0A6 362 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 KCNK12Q9HB15 430 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 TRAV18A0A075B6X5 111 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 KRBOX1C9JBD0 128 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 SLC22A5O76082 557 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 LIPCP11150 499 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 NDUFB7P17568 137 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 HLCSP50747 726 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 KDF1Q8NAX2 398 aaPredicted RBP11.32□□□□□ -0.6
PCF11-201ENST00000298281 PEBP4Q96S96 227 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 PELI2Q9HAT8 420 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 V9GYS6 101 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 SETD1AO15047 1707 aaKnown RBP11.32□□□□□ -0.6
PCF11-201ENST00000298281 HEPACAM2A8MVW5 462 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 BAMBIQ13145 260 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 GPR50Q13585 617 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 MLF2Q15773 248 aaPredicted RBP11.32□□□□□ -0.6
PCF11-201ENST00000298281 SCML4Q8N228 414 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 CACNG6Q9BXT2 260 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 DPH3P1Q9H4G8 78 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 TNFRSF19Q9NS68 423 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 BOKQ9UMX3 212 aaPredicted RBP11.32□□□□□ -0.6
PCF11-201ENST00000298281 ZNF840PA6NDX5 716 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 F5H5P2 479 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 KIAA0513O60268 411 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 HOXB5P09067 269 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 SBSNQ6UWP8 590 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 RBM12BQ8IXT5 1001 aaKnown RBP11.32□□□□□ -0.6
PCF11-201ENST00000298281 GDPD1Q8N9F7 314 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 OR10G3Q8NGC4 313 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 CPNE4Q96A23 557 aaPredicted RBP11.32□□□□□ -0.6
PCF11-201ENST00000298281 LCORQ96JN0 433 aaPredicted RBP11.32□□□□□ -0.6
PCF11-201ENST00000298281 CLEC5AQ9NY25 188 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 ABCC6O95255 1503 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 SNAP29O95721 258 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 FABP1P07148 127 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 KLHDC8AQ8IYD2 350 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 PLD6Q8N2A8 252 aaKnown RBP11.32□□□□□ -0.6
PCF11-201ENST00000298281 OR4K13Q8NH42 304 aa11.32□□□□□ -0.6
PCF11-201ENST00000298281 CNTNAP3Q9BZ76 1288 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms