RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PRICKLE3O43900 615 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-201ENST00000225964 SDC1P18827 310 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 CCR7P32248 378 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 LGALS4P56470 323 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 TRA2BP62995 288 aaKnown RBP12.37□□□□□ -0.43
COL1A1-201ENST00000225964 BLOC1S1P78537 153 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 SLC14A1Q13336 389 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 AADACL3Q5VUY0 350 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 CNIH2Q6PI25 160 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 CCDC28AQ8IWP9 274 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 RBMXL3Q8N7X1 1067 aaKnown RBP12.37□□□□□ -0.43
COL1A1-201ENST00000225964 OR2A12Q8NGT7 310 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 LHPPQ9H008 270 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 CLEC3BP05452 202 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 KITLGP21583 273 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 HOXC13P31276 330 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 F2RL1P55085 397 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 CARD18P57730 90 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 RPL11P62913 178 aaKnown RBP12.37□□□□□ -0.43
COL1A1-201ENST00000225964 ACSM3Q53FZ2 586 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 SLC7A13Q8TCU3 470 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 MCOLN1Q9GZU1 580 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 IL17CQ9P0M4 197 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 IGKV6D-21A0A0A0MT36 114 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 A0A1W2PQ09 198 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 RNF212BA8MTL3 300 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF705FA8MVS1 300 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-201ENST00000225964 AGPAT2O15120 278 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 GALR3O60755 368 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF705DP0CH99 300 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF705BP0CI00 300 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-201ENST00000225964 ENPP1P22413 925 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 PKLRP30613 574 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 MAGEA6P43360 314 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 BATFQ16520 125 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 COQ5Q5HYK3 327 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 RTL6Q6ICC9 239 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 OR5K2Q8NHB8 316 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 C7orf43Q8WVR3 580 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 MIB2Q96AX9 1013 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 OR2B2Q9GZK3 357 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 SIDT1Q9NXL6 827 aaKnown RBP12.37□□□□□ -0.43
COL1A1-201ENST00000225964 hCG_1809904A0A1W2PP81 198 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 A0A1W2PPE2 198 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 A0A1W2PR64 198 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 A0A1W2PRV1 198 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 BMXP51813 675 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 WNT7BP56706 349 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 CTSL3PQ5NE16 218 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 PRICKLE2Q7Z3G6 844 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF595Q8IYB9 648 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 SLC6A18Q96N87 628 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 CMSS1Q9BQ75 279 aaKnown RBP12.37□□□□□ -0.43
COL1A1-201ENST00000225964 NICN1Q9BSH3 213 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 GSTO2Q9H4Y5 243 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 ANKRD10Q9NXR5 420 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 NME7Q9Y5B8 376 aa12.37□□□□□ -0.43
COL1A1-201ENST00000225964 G3V2L1 256 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 ARPC5O15511 151 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 DOK2O60496 412 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 MYF6P23409 242 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF140P52738 457 aaPredicted RBP12.36□□□□□ -0.43
COL1A1-201ENST00000225964 SLC36A2Q495M3 483 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 C1orf220Q5T0J3 134 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 OR7E24Q6IFN5 339 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 MEPCEQ7L2J0 689 aaKnown RBP12.36□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF687Q8N1G0 1237 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 TMEM178AQ8NBL3 297 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 DUSP19Q8WTR2 217 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 UPRTQ96BW1 309 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 FAM117AQ9C073 453 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF286AQ9HBT8 521 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 PRDM4Q9UKN5 801 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 PCDHGA7Q9Y5G6 932 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 SULT1B1O43704 296 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 HSD17B1P14061 328 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 TAZQ16635 292 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF322Q6U7Q0 402 aaPredicted RBP12.36□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF597Q96LX8 424 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 PLCXD1Q9NUJ7 323 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 DOT1LQ8TEK3 1739 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 WNT11O96014 354 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 SLC2A1P11166 492 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 HIST1H1TP22492 207 aaPredicted RBP12.36□□□□□ -0.43
COL1A1-201ENST00000225964 CCBE1Q6UXH8 406 aaPredicted RBP12.36□□□□□ -0.43
COL1A1-201ENST00000225964 SLC6A17Q9H1V8 727 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 NUBP2Q9Y5Y2 271 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 PAHP00439 452 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 HTR2BP41595 481 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 GAB1Q13480 694 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 METTL11BQ5VVY1 283 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 HBMQ6B0K9 141 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 LMNTD1Q8N9Z9 388 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 NKX3-1Q99801 234 aaPredicted RBP12.36□□□□□ -0.43
COL1A1-201ENST00000225964 SUCNR1Q9BXA5 334 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 SLC25A31Q9H0C2 315 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 DUSP13Q9UII6 198 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 V9GY05 133 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 RAB27BO00194 218 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 AIFM1O95831 613 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms