RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 GAL3ST1Q99999 423 aa2.95□□□□□ -1.94
SCAMP1-205ENST00000614488 MRPL13Q9BYD1 178 aaKnown RBP2.95□□□□□ -1.94
SCAMP1-205ENST00000614488 VCXQ9H320 206 aa2.95□□□□□ -1.94
SCAMP1-205ENST00000614488 IGHV3OR16-13A0A075B7E8 117 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 E7ESA3 106 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 PRKYO43930 277 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 FAM189A1O60320 539 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 ZNF324O75467 553 aaPredicted RBP2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 ADRB3P13945 408 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 PGCP20142 388 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 TPSB2P20231 275 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 PRKXP51817 358 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 SH3BGRP55822 239 aaPredicted RBP2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 MAP2K1Q02750 393 aaPredicted RBP2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 TPSAB1Q15661 275 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 KLF17Q5JT82 389 aaPredicted RBP2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 TSPO2Q5TGU0 170 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 CBLN3Q6UW01 205 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 ACP7Q6ZNF0 438 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 ACOT7LQ6ZUV0 252 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 COX15Q7KZN9 410 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 CNNM3Q8NE01 707 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 OR51S1Q8NGJ8 323 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 OR51G1Q8NGK1 321 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 PNPT1Q8TCS8 783 aaKnown RBP2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 TCTEX1D2Q8WW35 142 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 RPUSD4Q96CM3 377 aaKnown RBP2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 OR2M2Q96R28 347 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 SLC6A7Q99884 636 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 RSPH9Q9H1X1 276 aaPredicted RBP2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 SMYD3Q9H7B4 428 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 NUDT15Q9NV35 164 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 NUFIP1Q9UHK0 495 aaKnown RBP2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 TP53TG5Q9Y2B4 290 aa2.94□□□□□ -1.94
SCAMP1-205ENST00000614488 IGLV4-69A0A075B6H9 119 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 IGHV3-64DA0A0J9YX35 117 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 SPRR5A0A1B0GTR4 108 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 CTAGE5O15320 804 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 CHADO15335 359 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 MSH4O15457 936 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 LANCL1O43813 399 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 ZNF44P15621 663 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 CUL1Q13616 776 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 C11orf71Q6IPW1 123 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 CCDC137Q6PK04 289 aaKnown RBP2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 UNC5DQ6UXZ4 953 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 DPY19L4Q7Z388 723 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 PNKDQ8N490 385 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 OR51G2Q8NGK0 314 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 OR56B4Q8NH76 319 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 RNF185Q96GF1 192 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 RASL11BQ9BPW5 248 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 TREM2Q9NZC2 230 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 KIF25Q9UIL4 384 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 FRMPD4Q14CM0 1322 aa2.93□□□□□ -1.94
SCAMP1-205ENST00000614488 KIF2AO00139 706 aaPredicted RBP2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 PES1O00541 588 aaKnown RBP2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 DLGAP1O14490 977 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 PTBP3O95758 552 aaKnown RBP2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 CRISP2P16562 243 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 TNNI3P19429 210 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 KRTAP10-10P60014 251 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 GMFBP60983 142 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 EIF4EBP1Q13541 118 aaPredicted RBP2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 FAM43BQ6ZT52 329 aaPredicted RBP2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 RFLNAQ6ZTI6 216 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 TPRA1Q86W33 373 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 SAXO1Q8IYX7 474 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 ZNF540Q8NDQ6 660 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 OR6X1Q8NH79 312 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 SELENOMQ8WWX9 145 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 MRPS31Q92665 395 aaKnown RBP2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 RPL3LQ92901 407 aaKnown RBP2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 KCNA7Q96RP8 456 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 HIST1H4GQ99525 98 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 SCRT1Q9BWW7 348 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 SELENOIQ9C0D9 397 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 ALG6Q9Y672 507 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 CLCA3PQ9Y6N3 262 aa2.92□□□□□ -1.94
SCAMP1-205ENST00000614488 A0A1B0GUL7 405 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 A0A1W2PNV4 684 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 GSAPA4D1B5 854 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 LRCOL1A6NCL2 159 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 F8WDY8 70 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 TMX2-CTNND1H3BSU7 103 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 RIPK2O43353 540 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 MAGP20916 626 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 YWHABP31946 246 aaKnown RBP2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 LEPP41159 167 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 CAMLGP49069 296 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 TAS2R19P59542 299 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 EWSR1Q01844 656 aaKnown RBP eCLIP2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 PDZK1IP1Q13113 114 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 C1orf100Q5SVJ3 147 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 ZFP2Q6ZN57 461 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 GDPD3Q7L5L3 318 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 CNPY4Q8N129 248 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 ZNF619Q8N2I2 560 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 CCNL2Q96S94 520 aaPredicted RBP2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 SLC35A5Q9BS91 424 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms