RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 PDK4Q16654 411 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 NDUFA5Q16718 116 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 PPP1R3AQ16821 1122 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 PRTGQ2VWP7 1150 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 VWA2Q5GFL6 755 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 XKR6Q5GH73 641 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 CDKL4Q5MAI5 379 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 DCAF10Q5QP82 559 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 VWA5B1Q5TIE3 1220 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 FAM69BQ5VUD6 431 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 AGAP7PQ5VUJ5 663 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 TRIM40Q6P9F5 258 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 C6orf89Q6UWU4 347 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 ARSKQ6UWY0 536 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 TMIGD1Q6UXZ0 262 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 COX15Q7KZN9 410 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 PPP1R32Q7Z5V6 425 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 CMC1Q7Z7K0 106 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 SPATA6LQ8N4H0 392 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 ZADH2Q8N4Q0 377 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 PTGR2Q8N8N7 351 aaPredicted RBP4.31□□□□□ -1.72
ZNF540-204ENST00000586792 MFSD9Q8NBP5 474 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 NOA1Q8NC60 698 aaKnown RBP4.31□□□□□ -1.72
ZNF540-204ENST00000586792 PSD4Q8NDX1 1056 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 BHLHE23Q8NDY6 225 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 FDCSPQ8NFU4 85 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 ABHD11Q8NFV4 315 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 OR9A4Q8NGU2 314 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 HUS1BQ8NHY5 278 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 RP9Q8TA86 221 aaKnown RBP4.31□□□□□ -1.72
ZNF540-204ENST00000586792 SLC22A8Q8TCC7 542 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.31□□□□□ -1.72
ZNF540-204ENST00000586792 DNAJA4Q8WW22 397 aaPredicted RBP4.31□□□□□ -1.72
ZNF540-204ENST00000586792 BCL2L2Q92843 193 aaPredicted RBP4.31□□□□□ -1.72
ZNF540-204ENST00000586792 NEIL2Q969S2 332 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 UBE2E3Q969T4 207 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 EFHD2Q96C19 240 aaPredicted RBP4.31□□□□□ -1.72
ZNF540-204ENST00000586792 C10orf90Q96M02 699 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 KLHL15Q96M94 604 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 WDFY2Q96P53 400 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 AGAP4Q96P64 663 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 VKORC1Q9BQB6 163 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 CCDC28BQ9BUN5 200 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 EFCAB11Q9BUY7 163 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 FAM192AQ9GZU8 254 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 ILKAPQ9H0C8 392 aaPredicted RBP4.31□□□□□ -1.72
ZNF540-204ENST00000586792 HRH4Q9H3N8 390 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 ALG9Q9H6U8 611 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 ZNF160Q9HCG1 818 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 ZDHHC18Q9NUE0 388 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 RLIMQ9NVW2 624 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 FKBP14Q9NWM8 211 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 NDUFA13Q9P0J0 144 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 ABI3Q9P2A4 366 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 OPTCQ9UBM4 332 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 FBXL4Q9UKA2 621 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 VPS4AQ9UN37 437 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 PRELID1Q9Y255 219 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 MRPS33Q9Y291 106 aaKnown RBP4.31□□□□□ -1.72
ZNF540-204ENST00000586792 KNTC1P50748 2209 aa4.31□□□□□ -1.72
ZNF540-204ENST00000586792 FAM208BQ5VWN6 2430 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 IGLV3-12A0A075B6K2 115 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 A0A096LPK6 155 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 GOLGA8OA6NCC3 632 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 ZNF860A6NHJ4 632 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 VSTM2BA6NLU5 285 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 GOLGA8NF8WBI6 632 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 F8WDY8 70 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 SGK494L7N484 410 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 WRBO00258 174 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 ADAMDEC1O15204 470 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 ALOX12BO75342 701 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 RDH16O75452 317 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 CRTAPO75718 401 aaPredicted RBP4.3□□□□□ -1.72
ZNF540-204ENST00000586792 CDC123O75794 336 aaPredicted RBP4.3□□□□□ -1.72
ZNF540-204ENST00000586792 KLHL2O95198 593 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 CH25HO95992 272 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 CHEK2O96017 543 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 HPP00738 406 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 RLN1P04808 185 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 C2P06681 752 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 UMODP07911 640 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 FHP07954 510 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 FAM58BPP0C7Q3 252 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 SLC35E2BP0CK96 405 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 C1GALT1C1LP0DN25 315 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 CLUP10909 449 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 ICAM2P13598 275 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 HPGDP15428 266 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 SERPINB1P30740 379 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 PCP4P48539 62 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 CAMPP49913 170 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 RAP1GDS1P52306 607 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 NAGLUP54802 743 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 TAS2R50P59544 299 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 RAB8AP61006 207 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 CSNK2BP67870 215 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 ARG2P78540 354 aa4.3□□□□□ -1.72
ZNF540-204ENST00000586792 MAT1AQ00266 395 aaKnown RBP4.3□□□□□ -1.72
ZNF540-204ENST00000586792 REEP5Q00765 189 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms