RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 KIAA0513O60268 411 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 PRKD3O94806 890 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 CPSF4O95639 269 aaKnown RBP10.51□□□□□ -0.73
GABPB1-206ENST00000543881 AK1P00568 194 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 CSTAP01040 98 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 YES1P07947 543 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 SOD3P08294 240 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 ALDOCP09972 364 aaKnown RBP10.51□□□□□ -0.73
GABPB1-206ENST00000543881 UBTFL6P0CB48 400 aaPredicted RBP10.51□□□□□ -0.73
GABPB1-206ENST00000543881 UQCRC2P22695 453 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 CDKN1AP38936 164 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 SESN3P58005 492 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 RAC3P60763 192 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 PLAURQ03405 335 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 CASP8Q14790 479 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 TIGD2Q4W5G0 525 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 SFRP5Q5T4F7 317 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 SAXO2Q658L1 398 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 TYW3Q6IPR3 259 aaKnown RBP10.51□□□□□ -0.73
GABPB1-206ENST00000543881 ADAM5Q6NVV9 412 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 C16orf62Q7Z3J2 963 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 HMGN2P46Q86SG4 172 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 ATG4DQ86TL0 474 aaPredicted RBP10.51□□□□□ -0.73
GABPB1-206ENST00000543881 FAM71CQ8NEG0 241 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 LILRB1Q8NHL6 650 aaPredicted RBP10.51□□□□□ -0.73
GABPB1-206ENST00000543881 RAB3IL1Q8TBN0 382 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 XAGE5Q8WWM1 108 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 TESCQ96BS2 214 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 PSD2Q9BQI7 771 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 BCO1Q9HAY6 547 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 GP6Q9HCN6 339 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 RAB21Q9UL25 225 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 PCDHGB4Q9UN71 923 aa10.51□□□□□ -0.73
GABPB1-206ENST00000543881 C9JVG2 144 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 ADAM11O75078 769 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 ADAP00813 363 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 DANCRP0C864 163 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 LBPP18428 481 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 IL12AP29459 219 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 SLC7A1P30825 629 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 PGM1P36871 562 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 NME5P56597 212 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 BST1Q10588 318 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 STX3Q13277 289 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 KRTAP24-1Q3LI83 254 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 CEP85LQ5SZL2 805 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 AP1ARQ63HQ0 302 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 ALKBH2Q6NS38 261 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 SEZ6L2Q6UXD5 910 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 FRRS1Q6ZNA5 592 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 SLC43A2Q8N370 569 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 STEAP2Q8NFT2 490 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 ST8SIA1Q92185 356 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 ZNF75CPQ92670 426 aaPredicted RBP10.5□□□□□ -0.73
GABPB1-206ENST00000543881 FBXW5Q969U6 566 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 ZNF775Q96BV0 537 aaPredicted RBP10.5□□□□□ -0.73
GABPB1-206ENST00000543881 ROPN1LQ96C74 230 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 NEURL3Q96EH8 262 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 OR5B2Q96R09 309 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 ZNF300Q96RE9 604 aaPredicted RBP10.5□□□□□ -0.73
GABPB1-206ENST00000543881 SAP130Q9H0E3 1048 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 CENPHQ9H3R5 247 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 MEAF6Q9HAF1 191 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 KCNK9Q9NPC2 374 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 FANCFQ9NPI8 374 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 ACER3Q9NUN7 267 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 EXD2Q9NVH0 621 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 PRSS50Q9UI38 385 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 CDC42EP3Q9UKI2 254 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 LIPT1Q9Y234 373 aa10.5□□□□□ -0.73
GABPB1-206ENST00000543881 CLDN24A6NM45 220 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 SDHDO14521 159 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 CLOCKO15516 846 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 CYTIPO60759 359 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 SNUPNO95149 360 aaKnown RBP10.49□□□□□ -0.73
GABPB1-206ENST00000543881 IGHV4-39P01824 125 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 GUSBP08236 651 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 WDR4P57081 412 aaKnown RBP10.49□□□□□ -0.73
GABPB1-206ENST00000543881 UFM1P61960 85 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 MERTKQ12866 999 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 TAB1Q15750 504 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 FAM174BQ3ZCQ3 159 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 ANXA8L1Q5VT79 327 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 OGFOD2Q6N063 350 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 C3orf33Q6P1S2 294 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 DNM1P46Q6ZS02 220 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 EIF3MQ7L2H7 374 aaKnown RBP10.49□□□□□ -0.73
GABPB1-206ENST00000543881 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.49□□□□□ -0.73
GABPB1-206ENST00000543881 ZNF619Q8N2I2 560 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 SMAP2Q8WU79 429 aaPredicted RBP10.49□□□□□ -0.73
GABPB1-206ENST00000543881 SLC35A5Q9BS91 424 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 CCDC106Q9BWC9 280 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 HDHD5Q9BXW7 423 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 KLHL9Q9P2J3 617 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 WDR45Q9Y484 360 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 RNF115Q9Y4L5 304 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 MAGED1Q9Y5V3 778 aaPredicted RBP10.49□□□□□ -0.73
GABPB1-206ENST00000543881 E9PBE3 544 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 HMGN4O00479 90 aa10.49□□□□□ -0.73
GABPB1-206ENST00000543881 GPRIN2O60269 458 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms