RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 TFAP2CQ92754 450 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 SGK3Q96BR1 496 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 PRRC1Q96M27 445 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 SMIM3Q9BZL3 60 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 NMNAT2Q9BZQ4 307 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 NXF5Q9H1B4 397 aaKnown RBP9.34□□□□□ -0.91
COL4A6-208ENST00000538570 NT5DC2Q9H857 520 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 DNAJB11Q9UBS4 358 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 SLCO3A1Q9UIG8 710 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 FANCGO15287 622 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 GPR137BO60478 399 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 SCO1O75880 301 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 PRSS56P0CW18 603 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 RBMS1P29558 406 aaKnown RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 NTSR1P30989 418 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 ARHGAP19Q14CB8 494 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 C6orf132Q5T0Z8 1188 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 SLC6A19Q695T7 634 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 OR2M2Q96R28 347 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 PARP4Q9UKK3 1724 aaKnown RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 LMO7Q8WWI1 1683 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 P2RX6O15547 441 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 CLN5O75503 358 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 SNAI1O95863 264 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF28P17035 718 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 SPOCK1Q08629 439 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 DEFB110Q30KQ9 67 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 PIP5KL1Q5T9C9 394 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 LCTLQ6UWM7 567 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 ABHD12BQ7Z5M8 362 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 NPWQ8N729 165 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF439Q8NDP4 499 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 RSC1A1Q92681 617 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 C14orf79Q96F83 325 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 C4orf36Q96KX1 117 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 MICU1Q9BPX6 476 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 CHRDQ9H2X0 955 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 GSTO2Q9H4Y5 243 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 INPP5EQ9NRR6 644 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 KCMF1Q9P0J7 381 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 USP36Q9P275 1121 aaKnown RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 SLC35A3Q9Y2D2 325 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 LOC102725191A0A1B0GVB3 256 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 C17orf105B2RV13 164 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 B4DXG7 233 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF780AO75290 641 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 GIFP27352 417 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 EFNA3P52797 238 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 TAS2R19P59542 299 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 SOX4Q06945 474 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 ABHD17BQ5VST6 288 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 METAP1DQ6UB28 335 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 NRARPQ7Z6K4 114 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 FIBINQ8TAL6 211 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 ADAMTS14Q8WXS8 1223 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 USB1Q9BQ65 265 aaKnown RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 C1QTNF2Q9BXJ5 285 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 SAP130Q9H0E3 1048 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 DDX31Q9H8H2 851 aaKnown RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 CNOT2Q9NZN8 540 aaKnown RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 ROBO1Q9Y6N7 1651 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 TNFSF8P32971 234 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 TLE1Q04724 770 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 KIAA0141Q14154 515 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 OR7A5Q15622 319 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 SBSNQ6UWP8 590 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 STEAP2Q8NFT2 490 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 DAZAP1Q96EP5 407 aaKnown RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 PTTG3PQ9NZH4 202 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 ACTL7AQ9Y615 435 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 OR2T1O43869 369 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 PRICKLE3O43900 615 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 TNFSF4P23510 183 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 DLX5P56178 289 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 SLC14A1Q13336 389 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 RUNX3Q13761 415 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 UBE2NLQ5JXB2 153 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 LRRC28Q86X40 367 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 RDH10Q8IZV5 341 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 ACVR1CQ8NER5 493 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 SFXN2Q96NB2 322 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 ARHGAP39Q9C0H5 1083 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 NAA50Q9GZZ1 169 aaKnown RBP9.33□□□□□ -0.92
COL4A6-208ENST00000538570 SMCO4Q9NRQ5 59 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 CUTCQ9NTM9 273 aa9.33□□□□□ -0.92
COL4A6-208ENST00000538570 CYB5BO43169 146 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 MED6O75586 246 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 GPR150Q8NGU9 434 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 CD200R1Q8TD46 325 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 PCYT2Q99447 389 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 INIPQ9NRY2 104 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 PLEK2Q9NYT0 353 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 LUZP4Q9P127 313 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 ADAMTS4O75173 837 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 GPR32O75388 356 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 SEMA4FO95754 770 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 FUCA1P04066 466 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 CD70P32970 193 aa9.32□□□□□ -0.92
COL4A6-208ENST00000538570 SEC61A1P61619 476 aaKnown RBP9.32□□□□□ -0.92
COL4A6-208ENST00000538570 CXADRP78310 365 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms