RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 CLCF1Q9UBD9 225 aa11.53□□□□□ -0.56
VEGFA-224ENST00000523873 ABCD2Q9UBJ2 740 aa11.53□□□□□ -0.56
VEGFA-224ENST00000523873 Q9UFV3 132 aa11.53□□□□□ -0.56
VEGFA-224ENST00000523873 SPTBN1Q01082 2364 aaKnown RBP11.53□□□□□ -0.56
VEGFA-224ENST00000523873 PRORSD1PA6NEY8 169 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 CD8B2A6NJW9 211 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 FAM90A27PA6NNH2 459 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 CLDN1O95832 211 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 NCK1P16333 377 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 TNFRSF1BP20333 461 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 ME2P23368 584 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 HTR2AP28223 471 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 ELK4P28324 431 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 AGFG1P52594 562 aaKnown RBP11.52□□□□□ -0.57
VEGFA-224ENST00000523873 EEFSECP57772 596 aaKnown RBP11.52□□□□□ -0.57
VEGFA-224ENST00000523873 FOXF2Q12947 444 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 SELENBP1Q13228 472 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 SGCBQ16585 318 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 LRRC23Q53EV4 343 aaPredicted RBP11.52□□□□□ -0.57
VEGFA-224ENST00000523873 INTS11Q5TA45 600 aaKnown RBP11.52□□□□□ -0.57
VEGFA-224ENST00000523873 MTFR2Q6P444 385 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 CHMP1BQ7LBR1 199 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 ADGRE4PQ86SQ3 457 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 PATL1Q86TB9 770 aaKnown RBP11.52□□□□□ -0.57
VEGFA-224ENST00000523873 ADGRG3Q86Y34 549 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 LIX1LQ8IVB5 337 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 FAM156AQ8NDB6 213 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 OR4D11Q8NGI4 311 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 OR2V1Q8NHB1 315 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 VANGL1Q8TAA9 524 aaPredicted RBP11.52□□□□□ -0.57
VEGFA-224ENST00000523873 SLC26A7Q8TE54 656 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 OR5B2Q96R09 309 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 ARHGDIGQ99819 225 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 SRXN1Q9BYN0 137 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 OR11A1Q9GZK7 315 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 ALG2Q9H553 416 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 ARMC7Q9H6L4 198 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 COQ10BQ9H8M1 238 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 TMEM181Q9P2C4 612 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 OSGIN1Q9UJX0 560 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 SLC13A4Q9UKG4 626 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 FREM1Q5H8C1 2179 aa11.52□□□□□ -0.57
VEGFA-224ENST00000523873 UBR5O95071 2799 aaPredicted RBP11.52□□□□□ -0.57
VEGFA-224ENST00000523873 GCN1Q92616 2671 aaKnown RBP11.51□□□□□ -0.57
VEGFA-224ENST00000523873 TMED7-TICAM2A0A0A6YYA0 188 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 MBD3L4A6NDZ8 208 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-224ENST00000523873 MBD3L3A6NE82 208 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-224ENST00000523873 MBD3L5A6NJ08 208 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-224ENST00000523873 FAAHO00519 579 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 TPST2O60704 377 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 AQP8O94778 261 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 LGI1O95970 557 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 HOXD4P09016 255 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-224ENST00000523873 T-ENOLP0DO92 83 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 TFPIP10646 304 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 UQCRBP14927 111 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 KLK2P20151 261 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 KCNJ5P48544 419 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 POLR2HP52434 150 aaKnown RBP11.51□□□□□ -0.57
VEGFA-224ENST00000523873 SMSP52788 366 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 DLX5P56178 289 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 RGS8P57771 180 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-224ENST00000523873 RPS3AP61247 264 aaKnown RBP11.51□□□□□ -0.57
VEGFA-224ENST00000523873 BNIP2Q12982 314 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 VEZF1Q14119 521 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 PON3Q15166 354 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 NPTX1Q15818 432 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 ZSWIM7Q19AV6 140 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 RIPPLY2Q5TAB7 128 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 HBMQ6B0K9 141 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 WBP2NLQ6ICG8 309 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 C3orf33Q6P1S2 294 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 RINLQ6ZS11 566 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 ESPNLQ6ZVH7 1005 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 P4HA3Q7Z4N8 544 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 RBM45Q8IUH3 476 aaKnown RBP11.51□□□□□ -0.57
VEGFA-224ENST00000523873 DEFB107AQ8IZN7 70 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 GCNT2Q8N0V5 402 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 PGAM4Q8N0Y7 254 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 ZNF808Q8N4W9 903 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-224ENST00000523873 MBD3L2Q8NHZ7 208 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-224ENST00000523873 FNDC9Q8TBE3 224 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 ROBO4Q8WZ75 1007 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 KCTD14Q9BQ13 255 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-224ENST00000523873 UCK2Q9BZX2 261 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 ADAM19Q9H013 955 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 CALHM2Q9HA72 323 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 SPAG4Q9NPE6 437 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 CHRNA9Q9UGM1 479 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 EGFL7Q9UHF1 273 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 AP3M1Q9Y2T2 418 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 TMED7Q9Y3B3 224 aa11.51□□□□□ -0.57
VEGFA-224ENST00000523873 IGHV3-15A0A0B4J1V0 119 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 ZC3H12DA2A288 527 aaKnown RBP11.5□□□□□ -0.57
VEGFA-224ENST00000523873 NKX2-6A6NCS4 301 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 SLC22A20A6NK97 555 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 B2RBV5 119 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 TMEM229AB2RXF0 380 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 CXCR6O00574 342 aa11.5□□□□□ -0.57
VEGFA-224ENST00000523873 ADAMDEC1O15204 470 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms