RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TFAP2EQ6VUC0 442 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 LRRC74BQ6ZQY2 392 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 FCRLAQ7L513 359 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 ATG4DQ86TL0 474 aaPredicted RBP11.21□□□□□ -0.61
HSPG2-212ENST00000493940 VRK2Q86Y07 508 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 MSRB3Q8IXL7 192 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 GABRG1Q8N1C3 465 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 GLB1L3Q8NCI6 653 aaPredicted RBP11.21□□□□□ -0.61
HSPG2-212ENST00000493940 GTF2H4Q92759 462 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 NINJ1Q92982 152 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 CPNE4Q96A23 557 aaPredicted RBP11.21□□□□□ -0.61
HSPG2-212ENST00000493940 PIK3IP1Q96FE7 263 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 C7orf26Q96N11 449 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 TRNT1Q96Q11 434 aaKnown RBP11.21□□□□□ -0.61
HSPG2-212ENST00000493940 OR5B2Q96R09 309 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 PSD2Q9BQI7 771 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 HHATLQ9HCP6 504 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 POLE3Q9NRF9 147 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 SLC25A37Q9NYZ2 338 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 ZIM2Q9NZV7 527 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 PRSS50Q9UI38 385 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 EMC9Q9Y3B6 208 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 PCDHB14Q9Y5E9 798 aa11.21□□□□□ -0.61
HSPG2-212ENST00000493940 AGR2O95994 175 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 TFPTP0C1Z6 253 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 GKN3PP0CG01 181 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 ZCCHC18P0CG32 403 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 H2AFXP16104 143 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-212ENST00000493940 PGCP20142 388 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 CCNA2P20248 432 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 DIO1P49895 249 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 RAC3P60763 192 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 ADAM8P78325 824 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 GSTA3Q16772 222 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 RPS26P11Q5JNZ5 115 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-212ENST00000493940 PAGE3Q5JUK9 113 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 PDSS1Q5T2R2 415 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 FBXW10Q5XX13 1052 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 CXorf67Q86X51 503 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-212ENST00000493940 CLIP4Q8N3C7 705 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 SLC38A5Q8WUX1 472 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 ST8SIA1Q92185 356 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 MBD6Q96DN6 1003 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 THOC1Q96FV9 657 aaKnown RBP11.2□□□□□ -0.62
HSPG2-212ENST00000493940 SLC39A3Q9BRY0 314 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 MED18Q9BUE0 208 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 MTHFD2LQ9H903 347 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-212ENST00000493940 TPT1P8Q9HAU6 139 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-212ENST00000493940 KLHL13Q9P2N7 655 aa11.2□□□□□ -0.62
HSPG2-212ENST00000493940 ABCA2Q9BZC7 2435 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 DSPPQ9NZW4 1301 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 DNHD1Q96M86 4753 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 ZC3H12DA2A288 527 aaKnown RBP11.19□□□□□ -0.62
HSPG2-212ENST00000493940 CASKO14936 926 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 CYTIPO60759 359 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 PRKD3O94806 890 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 RAF1P04049 648 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 YES1P07947 543 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 NR2F1P10589 423 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 IMPDH2P12268 514 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 PRG2P13727 222 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 DNASE1P24855 282 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 ACAA2P42765 397 aaKnown RBP11.19□□□□□ -0.62
HSPG2-212ENST00000493940 DEFB113Q30KQ7 82 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 SYT14P1Q58G82 188 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 MRPL2Q5T653 305 aaKnown RBP11.19□□□□□ -0.62
HSPG2-212ENST00000493940 C3orf33Q6P1S2 294 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 SEZ6L2Q6UXD5 910 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 ZNF836Q6ZNA1 936 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 TMPPEQ6ZT21 453 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 COMTD1Q86VU5 262 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 CCDC103Q8IW40 242 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 MIER2Q8N344 545 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 MAL2Q969L2 176 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 ZBTB18Q99592 522 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 BCO1Q9HAY6 547 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 EXOSC3Q9NQT5 275 aaKnown RBP11.19□□□□□ -0.62
HSPG2-212ENST00000493940 GLRX2Q9NS18 164 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 OSGIN1Q9UJX0 560 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 LIPT1Q9Y234 373 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 SLC35A3Q9Y2D2 325 aa11.19□□□□□ -0.62
HSPG2-212ENST00000493940 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-212ENST00000493940 TMEM72A0PK05 275 aa11.18□□□□□ -0.62
HSPG2-212ENST00000493940 FAM234BA2RU67 622 aa11.18□□□□□ -0.62
HSPG2-212ENST00000493940 ADAP00813 363 aa11.18□□□□□ -0.62
HSPG2-212ENST00000493940 BCHEP06276 602 aa11.18□□□□□ -0.62
HSPG2-212ENST00000493940 FESP07332 822 aa11.18□□□□□ -0.62
HSPG2-212ENST00000493940 PSMB1P20618 241 aaKnown RBP11.18□□□□□ -0.62
HSPG2-212ENST00000493940 SLC7A1P30825 629 aa11.18□□□□□ -0.62
HSPG2-212ENST00000493940 HOXC12P31275 282 aa11.18□□□□□ -0.62
HSPG2-212ENST00000493940 CRATP43155 626 aa11.18□□□□□ -0.62
HSPG2-212ENST00000493940 MRPL19P49406 292 aaKnown RBP11.18□□□□□ -0.62
HSPG2-212ENST00000493940 AQP5P55064 265 aa11.18□□□□□ -0.62
HSPG2-212ENST00000493940 FOXG1P55316 489 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-212ENST00000493940 EPS8Q12929 822 aa11.18□□□□□ -0.62
HSPG2-212ENST00000493940 FOXD4Q12950 439 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-212ENST00000493940 RNPS1Q15287 305 aaKnown RBP11.18□□□□□ -0.62
HSPG2-212ENST00000493940 BLOC1S3Q6QNY0 202 aa11.18□□□□□ -0.62
HSPG2-212ENST00000493940 BEND4Q6ZU67 534 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms