RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 FKBP7Q9Y680 259 aa4.49□□□□□ -1.69
SNRNP40-204ENST00000474025 PMF1-BGLAPU3KQ54 211 aa4.49□□□□□ -1.69
SNRNP40-204ENST00000474025 KMT2CQ8NEZ4 4911 aaKnown RBP4.49□□□□□ -1.69
SNRNP40-204ENST00000474025 HEATR1Q9H583 2144 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 ELOA3CA0A087WX78 387 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 A0A0A6YYJ9 748 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 CIB4A0PJX0 185 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 CCDC151A5D8V7 595 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 CCT8L1PA6NM43 557 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF716A6NP11 495 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 TRIM49D1C9J1S8 452 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 ATP6V1G2-DDX39BF2Z307 99 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 NPIPB9F8W1W9 429 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 SLCO1B7G3V0H7 640 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 H3BNH8 94 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 PDLIM1O00151 329 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 RSL1D1O76021 490 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 VENTXO95231 258 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 HSPA4LO95757 839 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 ALOX5P09917 674 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 EGR1P18146 543 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 TAC1P20366 129 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 IMPDH1P20839 514 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 IL2RGP31785 369 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 NTF4P34130 210 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 PHBP35232 272 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 SRP14P37108 136 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 COMPP49747 757 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 DIO1P49895 249 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 SERPINB9P50453 376 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 PRKAA2P54646 552 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 PHC1P78364 1004 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 PDE7AQ13946 482 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 LASP1Q14847 261 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 KIAA0040Q15053 153 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 PDK3Q15120 406 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 QPRTQ15274 297 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 CARTPTQ16568 116 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 IMPG1Q17R60 797 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 ZSWIM7Q19AV6 140 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 TEX35Q5T0J7 233 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 XP32Q5T750 250 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 OR7E24Q6IFN5 339 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 ZCCHC12Q6PEW1 402 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 TMPPEQ6ZT21 453 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 UBE2J2Q8N2K1 259 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 ANKS4BQ8N8V4 417 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 WDR31Q8NA23 367 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF527Q8NB42 609 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 OR5W2Q8NH69 310 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 DCAKDQ8WVC6 231 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 JADE3Q92613 823 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 CDS1Q92903 461 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 APH1AQ96BI3 265 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 FBXO17Q96EF6 278 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 FAM120BQ96EK7 910 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 L3HYPDHQ96EM0 354 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 MUS81Q96NY9 551 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 OR5B2Q96R09 309 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 STACQ99469 402 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 C1QTNF6Q9BXI9 259 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 BHLHE41Q9C0J9 482 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 SAP130Q9H0E3 1048 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 QRSL1Q9H0R6 528 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 RAB17Q9H0T7 212 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 GSTO2Q9H4Y5 243 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 ANKZF1Q9H8Y5 726 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 TNFRSF12AQ9NP84 129 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 MYOZ1Q9NP98 299 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 SIRT3Q9NTG7 399 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 ACSS1Q9NUB1 689 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 ASB6Q9NWX5 421 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 GIN1Q9NXP7 522 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 EMC3Q9P0I2 261 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 TMEM216Q9P0N5 145 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 STK38LQ9Y2H1 464 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 NOSIPQ9Y314 301 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 CCL27Q9Y4X3 112 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 ATP23Q9Y6H3 246 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 NBEAL2Q6ZNJ1 2754 aa4.48□□□□□ -1.69
SNRNP40-204ENST00000474025 LRP5LA4QPB2 252 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 ADARB2-AS1A8MUL3 147 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 GTPBP1O00178 669 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 AKAP10O43572 662 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 TBX19O60806 448 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 DNAJA2O60884 412 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 SLU7O95391 586 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 HMGN2P05204 90 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 SNRPAP09012 282 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 TACSTD2P09758 323 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 UBL4AP11441 157 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 CREB1P16220 341 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 EFNA1P20827 205 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 ATP6V1C1P21283 382 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 PRPH2P23942 346 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 ATP5F1P24539 256 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 GIFP27352 417 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 APEX1P27695 318 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 CCR4P51679 360 aa4.47□□□□□ -1.69
SNRNP40-204ENST00000474025 SLC16A1P53985 500 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms